Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2527 ATGTCTGCGATAGCAGCCTATTCACATATAATCTACAGAGAGAATCACCAGCAACAGGGGTTGATCAGCAGTAGTGGAGGAATCAGTTTGTTCTCGTTAAAGAGTACAAGTAGGAATAGATGGATTGAACGCAGAAAAAGAGAAGGAGAAGGGAAGAAGATAGGAAGGAGGAACGTGCGGGTGGAAGCGCTTTGGCCAGATTTGTCAAGACCCACTGTGCTTGAGATGGAACCCATCACAGATTCTGATCATCTCGATCAAATTCTACAAAATGCTCACCAGAATTCCCAGCCCATCGTCATCGATTGGATGGCCGGTTGGTGCAGGAAATGCATATATTTAAAGCCCAAGTTGGAAAAGCTGGCTGCTGAGTATCACACCAAGCTCAAATTTTATTGCGTGGATGTTAATAAAGTACCTCAATCTCTAGTTAAACGTGGCAATATCTCTCTTTGGAAAGATGGAGAGATGAAGGCAGAAGTTATTGGTGGGCACAAGGCTTGGTTGGTGATTGAAGAAGTGAGAGAAATGATCCAAAAGTTCATATAA 549 0.4317 MSAIAAYSHIIYRENHQQQGLISSSGGISLFSLKSTSRNRWIERRKREGEGKKIGRRNVRVEALWPDLSRPTVLEMEPITDSDHLDQILQNAHQNSQPIVIDWMAGWCRKCIYLKPKLEKLAAEYHTKLKFYCVDVNKVPQSLVKRGNISLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2527 182 CDD TRX_family 89 179 - -
Dere01g2527 182 Gene3D Glutaredoxin 73 181 - -
Dere01g2527 182 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 18 181 IPR044253 GO:0009570
Dere01g2527 182 SUPERFAMILY Thioredoxin-like 75 179 IPR036249 -
Dere01g2527 182 FunFam Thioredoxin 73 182 - -
Dere01g2527 182 Pfam Thioredoxin 86 164 IPR013766 -
Dere01g2527 182 ProSiteProfiles Thioredoxin domain profile. 59 182 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2527 Dere-ChrDere01 40110829 40112292 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2527 01 40110829 40112292 Dere01g2527 01 40110829 40112292 ECH