Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2512 ATGATACGTCATCGTCGCCACCACTCTAACACGGGATCTCTTGAGCGCGATGAAGTCTTCGTGCCAAAGAAAAAGTCCAATCTTGCTTGGTACTCTAAATACCTTAACAACCCGCCAGGCCGAGTCCTAAGCCTTGCTGTTACCCTCACTCTTGGCTGGCCTCTCTACCTAGCTTTTAACGTTTCAGGAAGGCCTTATAATCGTTTTGCTTGCCACTATGACCCATACGGCCCCATTTACTCAGATCGCGAACGCCTTCAAATATACATGTCAGATGCAGGGGTGCTTGCAGTGTTCTATGGGCTTTACCGTCTGGCCGTGGCAAAAGGACTTGCCTGGGTCGTGTGTGTTTATGGAGTGCCATTGTTGGTGGTCAACGGATTTTTGGTGTTGATCACGTATTTGCAGCATACTCACCCTGCATTGCCACACTATGATTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTAGCCACGGTGGACAGAGATTACGGAATTTTGAACAAGGTTTTCCATAATATTACAGACACCCATGTGACGCATCACTTGTTCTCCACGATGCCTCACTACCACGCCATGGAGGCTACAAAGGCAATCAAGCCAATTTTGGGAGAGTACTATCAGTTTGATGGAACCCCAGTTTACAAAGCAATGTGGAGGGAGCCAAAGGAATGTATTTATGTTGAGCCAGATGAAGGTGCTCAGAGCAATGGTGTATTCTGGTACAAGAACAAGTTGTGA 741 0.475 MIRHRRHHSNTGSLERDEVFVPKKKSNLAWYSKYLNNPPGRVLSLAVTLTLGWPLYLAFNVSGRPYNRFACHYDPYGPIYSDRERLQIYMSDAGVLAVFYGLYRLAVAKGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVTHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPVYKAMWREPKECIYVEPDEGAQSNGVFWYKNKL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2512 246 Coils Coil 243 246 - -
Dere01g2512 246 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 2 245 IPR012171 GO:0016491
Dere01g2512 246 Pfam Fatty acid desaturase 2 208 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2512 Dere-ChrDere01 39921317 39922113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2512 4 246 Lipid Metabolism Gene Families AT3G12120 79.424 3.48e-147 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2512 01 39921317 39922113 Dere01g2512 01 39921317 39922113 ECH