Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2494 ATGACCGACTCAATTGAACCGTCTACATCTTCTTCATTGTCGTCTTCAGCTAGAGACCCAAACACTGTCATTCATCCAAGGCGCGAGCCATTCGAGCATGGCCTCTTGCCCATCCCAAAGCTCATCTTCTCCGACCCAACGCAAACCCTAATCTCCCTGAAGCAGAAGCTTCTTGAGCTGTCTCCTAATCAACGAGTCCAGTCAGCGGCCATCTCCGAGGCCCTACAGATCTCCAGTGACTGTGCAAGGCTCGTTCTCGATACCCTCGCCTCGGTTTTACACTCAGAGTCCGAACCTTTAGTTACAGCCAAACCGGAGGAAATTGATTCCGTTGGTGCTGATGTCCATGATCTGGTTTTGTTCTTGTACATTCAATCTTACAAGAAGCTGCTTCCCAGAACGCACAAGGACTCTGCCGCCGTGGCCGATGTTTGGCCTTCCACATCCGCCTTTGATGGCTACTTGTCTGCCCTCTCTCCGTTGCAGCTTGTCCGTAGCAACAGCCGTCGGTTTATGCCATCACAAGCTGATGAGGAGGCGCATCAGTTATCATATCTGCAAAAGCACTTGGCCAACATTCTATCTCTTTTGGCAGAGCCTGTGGAGGGGGAAGGGGAAGAATCTCTGGTTTTAACTATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTCGGTGATAAAGGATCTGAAGGGAATTCTTTGAGTCAATCGTCTCCCTTTTTTGCAAACTCAGATCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAATATTGCTTCTTCTTTAGAAAATATTTCAGAAAGGGCTTCTCTAAAGGAAAATGGACCAGCCAGTGTATCTGATCAGGATGTTGCTATGGTTGATGCATGTACTGTCTCAGTTAAGGCCTCTTCAAGTACAAGAGGTCCATGTTTCATTGAAGGGATCTCTAAATCATCATATATGAAGAATGCATCTGAAATTAAGGGTTCCTCTGTTAAGGTTCTAAATTGCCATGAGTCTGCCATTTACATTTTAGCACCTCTGAGATATGCCACTGTCTATGGTTGCTCGGATGCTACAATCGTTCTTGGAGCAGTTGGCAAGGCTGTAAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCAAAACGCATATGTATTGCTAACTGCCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCACCCTACAATACATTTTACCCCCAGCTAGAAGGACACATGACTGAGGTTGGAATTCTGCCCACAGTAAACAGGTGGGATGAACCTCTGGCATTGGGTATGGTTGATCCTCATGATTCGTTATCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCTGCTGCACGGGTAGATCCTGATCAGTTCACCAATTTTGTGATTCCAAATTGGCTTGGAGGAGAATCCACTGGGCCTACAAAAGACAACCCATTTACATTACCAGATGCTTATATGGCTTCGCAGCTTAGAAATCAAAAAACTTTAGGGGAGATAAGACAACTCTTACGGGAAGCACCCCTTGAAGAAAATCGTAAAAGAGAATTGTCATCTGCGCTCCATGTGTACTTCAAGGACTGGTTATATGCGTCTGGGAACATTCGTCAACTCTACTGTCTACAAGTGGTGTTTGAGGCTGGATTGGAGATGGCTCAAGACCCAATGTGA 1743 0.4601 MTDSIEPSTSSSLSSSARDPNTVIHPRREPFEHGLLPIPKLIFSDPTQTLISLKQKLLELSPNQRVQSAAISEALQISSDCARLVLDTLASVLHSESEPLVTAKPEEIDSVGADVHDLVLFLYIQSYKKLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPVEGEGEESLVLTMDRFEHLGFLIQFGDKGSEGNSLSQSSPFFANSDPDMPAVPVPAAQVHDWLLQNIASSLENISERASLKENGPASVSDQDVAMVDACTVSVKASSSTRGPCFIEGISKSSYMKNASEIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYPQLEGHMTEVGILPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESAARVDPDQFTNFVIPNWLGGESTGPTKDNPFTLPDAYMASQLRNQKTLGEIRQLLREAPLEENRKRELSSALHVYFKDWLYASGNIRQLYCLQVVFEAGLEMAQDPM 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2494 580 MobiDBLite consensus disorder prediction 1 21 - -
Dere01g2494 580 SMART carp 378 412 IPR006599 -
Dere01g2494 580 SMART carp 340 377 IPR006599 -
Dere01g2494 580 Pfam Tubulin binding cofactor C 332 447 IPR012945 -
Dere01g2494 580 Gene3D - 313 473 IPR016098 -
Dere01g2494 580 PANTHER UNCHARACTERIZED 20 566 IPR039589 -
Dere01g2494 580 MobiDBLite consensus disorder prediction 1 25 - -
Dere01g2494 580 ProSiteProfiles C-CAP/cofactor C-like domain profile. 311 438 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2494 Dere-ChrDere01 39712170 39720881 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2494 01 39712170 39720881 Dere01g2494 01 39712170 39720881 ECH