Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2420 ATGGGTGGGCTCAAGGGATTCGTAAAGAAAGGGTTGGGAGAGATGGGCTTCATGGCCGGCGGCGGAGTGATCAACTGGTTCCCGGGACACATGGCAGCCGCTACCCAAGCTATTCGTCAGCGTCTTAAGGTTGCCGACTTCGTCATTGAAGTTCGAGACGCTCGCATTCCTTTGTCCTCCGCAAACTCCGATCTTCAGCCTCAGCTCTCTGGAAAACGCCGCGTCATTGCATTGAATAAGAAAGACTTGGCTAACCCCAATATAATGCATAAATGGATACATTATTTTGACACGTGCAAGCAAGATTGCGTTCCTATAAGTGCCCATAGCAAAAGCTCTGTTAAGAAGCTTCTCAATCTTGTTGAGTTCAAATTGAAGGAAGTGATTTCCAGGGAACCTACTCTACTTGTTATGGTGGTTGGTGTTCCTAATGTTGGGAAGTCAGCTTTAATTAACTCAATTCATCAAATTGCATTGTCTCACTTTCCAGTGCAGGAGAAGATGAAGCGAGCTACTGTGGGTCCACTGCCTGGTGTTACTCAAGATATTGCTGGGTATAAGATAGCACACCAACCGAGCATATATGTCTTGGATACTCCAGGGGTGCTGGTTCCTAGTATCCCAGACATTGAAACAGGGTTAAAGCTGGCTCTTGCAGGGTCTGTGAAAGATTCAGTGGTGGGTGAGGAGCGTATTGCTCAATACTTGCTGGCTGTTTTAAATACCCGGGGAACTCCAATTCACTGGAAGCACCTGAATAATAGGAGAATGGAAGGGATTCGATATGAATCTGAGGAAAAGCCTGTATACAATCCCAAAAACCTTAAGCCAAAGAGAATGAATCCGCCAAATAAATCTGATGTTGTCTATATTGAGGATCTTGTAATGGAAGTTCAACGTGCACTCTATCAGACACTAACGGAATTCAATGGCAACATAGAAGATGAGGGTGACTTAGAGGGCCTGATTGACCAGCAATTTGGTGTATTGCAGAAGGCGTTGAAGATACCTTACAAGGCTTCAGAAGCACGTTTAATGGTATCCAAGAAGTTTCTTACTCTATTTAGGACTGGTAAACTTGGACCTTTCATTCTTGATGATGTTCCTCATGCTTAG 1116 0.4462 MGGLKGFVKKGLGEMGFMAGGGVINWFPGHMAAATQAIRQRLKVADFVIEVRDARIPLSSANSDLQPQLSGKRRVIALNKKDLANPNIMHKWIHYFDTCKQDCVPISAHSKSSVKKLLNLVEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSHFPVQEKMKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIPDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRGTPIHWKHLNNRRMEGIRYESEEKPVYNPKNLKPKRMNPPNKSDVVYIEDLVMEVQRALYQTLTEFNGNIEDEGDLEGLIDQQFGVLQKALKIPYKASEARLMVSKKFLTLFRTGKLGPFILDDVPHA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2420 371 Gene3D - 208 267 IPR023179 -
Dere01g2420 371 Pfam 50S ribosome-binding GTPase 137 247 IPR006073 GO:0005525
Dere01g2420 371 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 34 205 IPR030378 GO:0005525
Dere01g2420 371 Gene3D - 24 203 IPR027417 -
Dere01g2420 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 217 IPR027417 -
Dere01g2420 371 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 19 370 - -
Dere01g2420 371 FunFam Mitochondrial GTPase 1 24 203 - -
Dere01g2420 371 CDD YlqF 26 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2420 Dere-ChrDere01 38602413 38606088 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2420 01 38602413 38606088 Dere01g2420 01 38602413 38606088 ECH