Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2370 ATGAACTCTAAGGCCATAGCCACTCTGCTTGCGGTCTTCTCCATTATACTTGCCTTAAACTTTAAAGTTTTCTTTGGGCCTCCTTCAATTCCGGGTTCCAAAGACCTGCTTCACACCGCTGACATACTCCATGTCACCGGAGCCGTCGGGCCAGAGAGCCTGGTTTTCGATGGCAATGGGGAGGGTCCCTACACCGGGGTCGCCGACGGTCGGATTCTCAAATGGCAAGGAGAGGATCGGGGTTGGACTGATTTTGCCTTCACCGCTTCTAATAGGACGGAGTGTACACGCCCATTTGCACCAGAGATGGAGCATATATGTGGGAGGCCACTGGGAATGAGGTTTGACAAGAAAAGTGGAGATCTATACATTGCTGATGCCTACCATGGCCTCCAAGTAGTAGGACCCACAGGAGGTTTAGCCACCCCTTTGGTGACACAAGTTGAGGGCCAGCCCTTGCGCTTCACCAATGACATGGATATCAGTGACGATGAAGATGTCATTTACTTCACTGATTCAAGTACAATCTTCCAAAGAAGGGAATTTATGGCTTCACTCCTTAGTGGGGACAAGACTGGTCGGTTGATGACATATGACAAATCAACCAAAGAAGTGACAGTCTTAATTAGAGGCCTTGCTTTTGCCAATGGAGTTGCACTGAGCAAAGATGGCTCATTTTTGGTGGTAGCAGAAACCACTACGCGCAAGATCCTAAGGCTTTGGCTTCGTGGACCTAACGCTGGTCAAGTTGACACATTTGCACTGCTTCCTGGGTTCCCAGACAATATAAGAAGAAACTCAAAGGGGGAGTTTTGGGTGGCTTTGCATGCAAAAGGAAGCCCTTTCGCCAAATTGGTTTCCTCAAACTCATGGGCTGGAAAGGCATTGCTGAATCTCCCACTTAGCTTCAAACAACTGCACGCATCGTTTTCTGGGTGGAAGCCTCACGCCTCTGCTGTTAAGCTGAGTGATAAAGGAGAAATAATGGGAGTCTTGGAAGATTGTGAAGGGAAGGCCTTGAGGTTTATTAGCGAATTGGAAGAGAAAGATGGGAAGCTTTGGATTGCATCGGTTTTAATGCCCTTTATTGGCATTTATGAGCTGTGA 1107 0.4797 MNSKAIATLLAVFSIILALNFKVFFGPPSIPGSKDLLHTADILHVTGAVGPESLVFDGNGEGPYTGVADGRILKWQGEDRGWTDFAFTASNRTECTRPFAPEMEHICGRPLGMRFDKKSGDLYIADAYHGLQVVGPTGGLATPLVTQVEGQPLRFTNDMDISDDEDVIYFTDSSTIFQRREFMASLLSGDKTGRLMTYDKSTKEVTVLIRGLAFANGVALSKDGSFLVVAETTTRKILRLWLRGPNAGQVDTFALLPGFPDNIRRNSKGEFWVALHAKGSPFAKLVSSNSWAGKALLNLPLSFKQLHASFSGWKPHASAVKLSDKGEIMGVLEDCEGKALRFISELEEKDGKLWIASVLMPFIGIYEL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2370 368 Gene3D - 35 368 IPR011042 -
Dere01g2370 368 Pfam Strictosidine synthase 157 244 IPR018119 GO:0009058|GO:0016844
Dere01g2370 368 Pfam Strictosidine synthase-like, N-terminal 36 75 - -
Dere01g2370 368 PANTHER STRICTOSIDINE SYNTHASE-RELATED 11 361 - -
Dere01g2370 368 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 35 368 - -
Dere01g2370 368 SUPERFAMILY Calcium-dependent phosphotriesterase 14 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2370 Dere-ChrDere01 38009051 38011058 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2370 01 38009051 38011058 Dere01g2370 01 38009051 38011058 ECH