Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2362 ATGGTTTCGTCTTCAATCTTTCTCAGGCCTTTCGTTCCTTCTGTTGCCATTGATCTCCGCCCTAAGAGCGCAACTGGTAGAAATACGTGGGAGAGCTTGGGATTTAACAAGTCAGCTAATTCGAAGTCAAACCGACTGATCTGTGCAAAGGGGTTCAAATTAAATTGCTCAATCGATAGAGAGATGGATGCGAGCACATCGGCTTTGGTGGATAGCGTTGCAGAGTGCTCAAATGAAGAGGAGATCAGGGAGCCTAGTCTTTCAACAGTGGTGATGAATTTTGATAACGAGTTTGATCCTTATGGAGCAGTCAGTACGCCCCTTTACCAAACTGCTACTTTTAAGCAGCCATCGGCAATAGAAAATGGTCCTTATGACTATACTAGAAGTGGAAATCCTACTCGAGATGCTTTGGAAAGGTTACTTGCAAAGCTTGATAAAGCAGATAGAGCCTTTTGCTTCAGCAGTGGAATGGCTGCTTTGAGTGCTGTTACTCATCTCGTTGGAACTGGTGAAGAAATTGTTGCTGGAGATGATTTGTATGGTGGCTCAGATAGATTGCTGTCCCAAGTAATTCTGAAGACTGGAGTTGTAGTGAAACGAGTAAATACAAGTGATCTAGATGAGGTGGCTTCTGCTATTGGACCTTGGACTAAGCTTGTGTGGCTGGAGAGTCCCACCAATCCTCGAATACAAATTTCTGATATTCAAAAAATAGCGGAGATGGCTCATGCACGTGGTGCTGTTGTATTGGTGGATAATAGTATAATGTCACCTGTGTTGTCCCAGCCATTGGAACTTGGAGCAGATATTGTTATGCATTCAGCTACCAAATTTATTTCCGGACATAGTGATATCATGGCTGGTGTCCTTGCTGTGAAAGGCAAGAGGTTGGCAAAAGAATTGTATTTCTTACAAAATGCAGAGGGTTCAGGCTTAGCTCCATTTGACTGTTGGCTCTGTTTGCGTGGAATCAAGACAATGGCCCTGCGAGTTGAGAAGCAGCAGGAGAATGCTCAGAAGATTGCTGAGTTTCTTGCCTCCCATCCTCGAGTGAAGAAAGTAAACTATGCCGGTCTTCCTGGTCATCCTGGACATGACTTACACTACTCTCAGGCAAAGGGTGCAGGATCTGTGCTCAGCTTTTTGACAGGCTCCCTGGCAGTCTCAAAGCATATTGTTGAAACTACCAAGTACTTCAGCATAACTGTCAGTTTTGGGAGTGTAAAGTCCCTCATAAGCATGCCCTGCTTTATGTCCCATGCCAGCATACCTGCTGCAGTCCGTGAGGCCAGAGGTTTAACTGAAGATCTTGTGCGTATTTCTGTGGGCATTGAGGATGTTAATGATCTTATTGCTGATCTAGACAGTGCACTTACATCCGGGCCTCTCTAA 1395 0.448 MVSSSIFLRPFVPSVAIDLRPKSATGRNTWESLGFNKSANSKSNRLICAKGFKLNCSIDREMDASTSALVDSVAECSNEEEIREPSLSTVVMNFDNEFDPYGAVSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALERLLAKLDKADRAFCFSSGMAALSAVTHLVGTGEEIVAGDDLYGGSDRLLSQVILKTGVVVKRVNTSDLDEVASAIGPWTKLVWLESPTNPRIQISDIQKIAEMAHARGAVVLVDNSIMSPVLSQPLELGADIVMHSATKFISGHSDIMAGVLAVKGKRLAKELYFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQENAQKIAEFLASHPRVKKVNYAGLPGHPGHDLHYSQAKGAGSVLSFLTGSLAVSKHIVETTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLVRISVGIEDVNDLIADLDSALTSGPL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2362 464 CDD CGS_like 102 459 IPR000277 GO:0019346|GO:0030170
Dere01g2362 464 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 270 284 IPR000277 GO:0019346|GO:0030170
Dere01g2362 464 FunFam Cystathionine beta-lyase 328 461 - -
Dere01g2362 464 Gene3D Aspartate Aminotransferase, domain 1 328 461 IPR015422 GO:0003824
Dere01g2362 464 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 87 460 IPR000277 GO:0019346|GO:0030170
Dere01g2362 464 Gene3D - 86 327 IPR015421 GO:0003824
Dere01g2362 464 FunFam Cystathionine gamma-synthase homolog 85 327 - -
Dere01g2362 464 Pfam Cys/Met metabolism PLP-dependent enzyme 89 459 IPR000277 GO:0019346|GO:0030170
Dere01g2362 464 PIRSF CGS 75 462 IPR000277 GO:0019346|GO:0030170
Dere01g2362 464 SUPERFAMILY PLP-dependent transferases 91 459 IPR015424 -
Dere01g2362 464 NCBIfam cystathionine beta-lyase 87 461 IPR006238 GO:0004121|GO:0071266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2362 Dere-ChrDere01 37902852 37908986 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2362 01 37902852 37908986 Dere01g2362 01 37902852 37908986 ECH