Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2329 ATGCTTGCGAACATGCGTATGCGTAAGTTTTTGCAAAGGGGGCTGTTCTTTAATCGCCTGCAGCTTTTGACGATGCCAAGTTTGGAGGATCCTTCTCGTCGCATCACTGGGTTCTCGAGCGCTGGGGTCGATAAAATCAGGAACCATTCCTCTTGTGCTGGCTTTAGCGGAGCTAATGGGTTAGACGCTGTCAGTTTTTGGAAAAGTGGCAAGGTAACTCGTCATTTTACGTCTGATCGCAATGATAGATATACTATAAAGGAGTTCTCTACTAAGCTACTTAAAAGCATCCCAGAATATGTGAAGATAGTGGAGGTTGGTCCAAGGGATGGATTGCAAAATGAGAAGAATATTGTTCCTACTGCTGTGAAAGTTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGCCTGTTGTTGAGGCAACAAGTTTTGTCTCACCAAAATGGGTACCACAGCTGGCAGATGCAAAGGATGTAATGGCAGCAATTCAGAATGTTGACGGTGCTAGCTTTCCTGTCTTAACTCCAAATCTTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAAGAAGTGGCTGTTTTTCCTGCAGCTTCAGAATCATTCTCTAAAGCAAATCTCAACTGTAGCATTGAGGATAATCTTGCTCGTTGCCGTGATATTGCTTCAGCTGCTAGAAACCTGTCAATCCCAGTCCGTGGATATATATCTTGCGTTGTGGGATGTCCGCTGGAAGGATTTATTGCTCCAACTACAGTAGCATATGTGGCGAAAGCACTCTATGACATGGGATGCTCAGAGATCTCACTAGGTGATACAATCGGTGTTGGTACACCTGGTACTGTGATTCCAATGCTTGAAGCTGTTCTTGATGTTGTTCCTGTTGACAAGCTTGCTGTTCATTTTCATGACACTTATGGTCAGGCTCTTTCAAATACTCTTGTTTCACTTCAGATGGGGATCAGCACGGTGGATTCATCTGTGTCTGGTCTGGGGGGTTGCCCATATGCGAAGGGTGCAACTGGGAATGTTGCCACGGAGGATGTTGTGTACATGTTGAATGGACTTAGAGTGAAAACCAACGTGGACCTTAGAAAGCTTATGCTGGCTGGGGATTATATCTGCAAGCATTTAGGACGTGCGTCTGGTTCAAAAGCCACAACTGCCTTGAGCAAACTTACAGCTAATGCCTCCAAACTGTGA 1203 0.4489 MLANMRMRKFLQRGLFFNRLQLLTMPSLEDPSRRITGFSSAGVDKIRNHSSCAGFSGANGLDAVSFWKSGKVTRHFTSDRNDRYTIKEFSTKLLKSIPEYVKIVEVGPRDGLQNEKNIVPTAVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVDGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCSIEDNLARCRDIASAARNLSIPVRGYISCVVGCPLEGFIAPTTVAYVAKALYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLRVKTNVDLRKLMLAGDYICKHLGRASGSKATTALSKLTANASKL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2329 400 CDD DRE_TIM_HMGL 103 376 - -
Dere01g2329 400 Pfam HMGL-like 101 374 IPR000891 GO:0003824
Dere01g2329 400 Gene3D Aldolase class I 94 393 IPR013785 -
Dere01g2329 400 ProSiteProfiles Pyruvate carboxyltransferase domain. 101 368 IPR000891 GO:0003824
Dere01g2329 400 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 95 393 - -
Dere01g2329 400 SUPERFAMILY Aldolase 96 383 - -
Dere01g2329 400 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 84 394 IPR043594 GO:0016833
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2329 Dere-ChrDere01 37604859 37609337 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2329 01 37604859 37609337 Dere01g2329 01 37604859 37609337 ECH