Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2307 ATGGATTCCTCATCTGCTTCCATTGATGGCCTTTCCGGGTTCAAGGATAAGGAGTCAATGGTTGACCCCTTCTTGGTTGAGGCTCTCCAGAACTCTCGTCACCGTCTCACCATTTTGCGTATGGAGCTTGATATCCAGAGGTTTCTGAATAATGCTGATCAGCAGCATTTTGAGTTCCAACACTTCCCTTCTTCCTATCTGCGACTGGCAGCTCATCGTGTTGCTCAACTCTATGGTATGCAAACGATGATTCAAGATAATGGTGTGGATGGCCAAGGAAGTAAAATAGTGGTGAGAAAATTAGCAGAAAGCAGGTATCCTGTGGTCCGCTTGTCTGAAATACCTGCCAAGCAGCTGGAAAATGATAAACCTGAACAGAGAAAAATTGCCATAAGGCCTAGGCCTAATAAAAGCAATGTAAATGAAATCAATGAAGCAGGACTGAAAGGAAATCCATTGAGAAGTGTGGAAGAGAGGAAGGAGGAATATGATCGGGCTCGAGCACGCATCTTCAGTAGCTCTAGAAGTTCTGATGCAAGTGATACATTGCCCCAGGTCCCTATGGATGGTAAAAATTGTAGTATGGGCAAGGATGAGAATGAAGCTGGCAAGAAACCCATGCCTGATTATGAAAAATGCATCAGCGTCAGGGATATTGGTTCTACTCGTGTTGCTATTTTAAGAGATAGGGAGAAGGATCGTAGTGATCCGGATTATGACCGTAGCTATGGAAGGTACGCTAGGAGTATTCCAAACTCTAACTTGGTGCCTTTTAATCTGCTCAAAGTTCAACCTTCATTTGCTCAATATGACAGTACTTTTAATCAGCTGGGTCAGCTGTCACAAACTCAAGCTTCACTTGGCTATGGACCCCCTTCAAGCACAATAATGAGTCCTTTTTGTGCCACAGGATTGAATCAGACATCTCGCGATGTTACTTACCTACAGTGGCCAAGTGCTGCTATGATGTATGCGCATTCATATGACCAATTTAGACATGCTGTTTTTCAGGCTCCCTTTGGTCAACAGCCACTGAGCTTTGATTATCCGCAGAACTACTAG 1062 0.4407 MDSSSASIDGLSGFKDKESMVDPFLVEALQNSRHRLTILRMELDIQRFLNNADQQHFEFQHFPSSYLRLAAHRVAQLYGMQTMIQDNGVDGQGSKIVVRKLAESRYPVVRLSEIPAKQLENDKPEQRKIAIRPRPNKSNVNEINEAGLKGNPLRSVEERKEEYDRARARIFSSSRSSDASDTLPQVPMDGKNCSMGKDENEAGKKPMPDYEKCISVRDIGSTRVAILRDREKDRSDPDYDRSYGRYARSIPNSNLVPFNLLKVQPSFAQYDSTFNQLGQLSQTQASLGYGPPSSTIMSPFCATGLNQTSRDVTYLQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYPQNY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2307 353 Gene3D - 13 134 IPR036867 GO:0003676
Dere01g2307 353 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 18 341 - -
Dere01g2307 353 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Dere01g2307 353 MobiDBLite consensus disorder prediction 194 208 - -
Dere01g2307 353 Pfam R3H domain 37 88 IPR001374 GO:0003676
Dere01g2307 353 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Dere01g2307 353 SMART R3H_4 19 101 IPR001374 GO:0003676
Dere01g2307 353 Pfam SUZ domain 126 174 IPR024771 -
Dere01g2307 353 MobiDBLite consensus disorder prediction 121 157 - -
Dere01g2307 353 MobiDBLite consensus disorder prediction 171 208 - -
Dere01g2307 353 CDD R3H_encore_like 34 100 - -
Dere01g2307 353 SUPERFAMILY R3H domain 11 136 IPR036867 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2307 Dere-ChrDere01 37368555 37372366 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2307 01 37368555 37372366 Dere01g2307 01 37368555 37372366 ECH