Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2296 ATGAGATTGTCTAAAATGGCTGTAGCCGTTGACCAACATCATGGATTTAAGCCATTTAGCCGATCCCACAGATGCATGCTTCAATCCTACGGTCACCTTGATCACAACATTTTGGAACTTGGCCAAACTACTCTAGCCCACTCCTTTAAACCAGCATTTGAGGCCGATAATATTCACCGCAGTTTCTCCACTCCATGCCTGCCCCTAACCACTTCAGCGGAGGAAGAGCATGGTTCCAATCCAAGGATTGCGATGGTTAGTGGACGTGGAGCTCCTTCACATGCTCTTGTTGTCGAGGTTGCTGTAGCTATGGCCTCCGGTGTTCGTCCTCTACCACTGTCAAAGGGGCTAGGTGGTGCCTATGTTTTCCGCAGCCAAAATGGTAATGATATTGCTGTGGCAAAGCCAGCAGATGAAGAACCTTTAGCTTTCAATAACCCAAAAGGCTTGGGGGGTCGAATGCTGGGCCAACCTGGATTGAAAGGCTCAATTCGGGTAGGCGAAGCTGGAATACGTGAATTGGCTGCTTATCTCCTTGACTATGGAGGTTTTGCTGGTGTACCTCCATCTGCTTTAGTAAAATTCTGTAATGCTCCCTTCACTGTTACTGATGCAGCCGAAGTTCCATCCACACCTTGCAAAATCGCTTCCCTCCAACGCTTTGTTGATCACGATTTTGACGCAGGAGAGTTGGGTCCTTCTTTCTACTTAGTTGATTCAGTTCATCACATTGGGATTTTAGACATCAGACTTCTAAATCTTGACAGACATGCAGGAAATATGCTTGTAAAGAGAAGCAACCACATTAGTAATGGAGTGGCTGAGCTTGTTCCCATAGACCATGGGCTTTGCCTGCCTGAGTGGCTGGATGATCCATATTTTGAGTGGCTGCATTGGCCACAAGCCTCCATTCCTTTCTCAGAGTCTGAACTTGAGTACATTTCCAAGCTTGATCCGTTCAGGGACGCAGAGCTGCTAAGAACTGAACTTCCTTTGTTGAGGGAGTCTTCAATACGGGTTCTTCTTGTTTGTACCATTTTCTTAAAGCAAGCTGCTGCTGCTGGCCTTTGTCTTGCTGATATAGGTCAAATGATGACTAGACAATTTTGCGGTGGAGTAGAAACACCAAGTGAAATAGAAAATATTTGTTTGCAAGTCATGTCTCGCATCCCTTGTGTTTGCAACCATGAGAAAATCAAAGAAGAAACTGAAAATGAGTCAAAATTATTCCAATTTGACAATGAAATTCAAGATGGATCCATTGAGGGATTGGAACTTGCACAATTCTTAGAGAGCCATCATGGAGTATCTCAGGCACCCAAATTGCCAGTGTCTTCATTTGCAGGATCAATGGATGGATTGGCAGTACTACCTCCATTGAATGAGGAAAACGATAATTGTATTACAAATGTTGATACAGGGAACACCATAGACAAAAGTAAAGAAGGGAGTTTGAGTTCCTCTTCGTGGAGCTATAATAGTGAAATTGGTGGCCTTTCCTTCGTAGGCCTGAACCAAATCGAATGGGAGTTGTTTTTGGAGATTTTTGAGAAGATTTTGTCTGGAGTATTTGAGGTCAAGGAGTGCAGAAACTGA 1596 0.4424 MRLSKMAVAVDQHHGFKPFSRSHRCMLQSYGHLDHNILELGQTTLAHSFKPAFEADNIHRSFSTPCLPLTTSAEEEHGSNPRIAMVSGRGAPSHALVVEVAVAMASGVRPLPLSKGLGGAYVFRSQNGNDIAVAKPADEEPLAFNNPKGLGGRMLGQPGLKGSIRVGEAGIRELAAYLLDYGGFAGVPPSALVKFCNAPFTVTDAAEVPSTPCKIASLQRFVDHDFDAGELGPSFYLVDSVHHIGILDIRLLNLDRHAGNMLVKRSNHISNGVAELVPIDHGLCLPEWLDDPYFEWLHWPQASIPFSESELEYISKLDPFRDAELLRTELPLLRESSIRVLLVCTIFLKQAAAAGLCLADIGQMMTRQFCGGVETPSEIENICLQVMSRIPCVCNHEKIKEETENESKLFQFDNEIQDGSIEGLELAQFLESHHGVSQAPKLPVSSFAGSMDGLAVLPPLNEENDNCITNVDTGNTIDKSKEGSLSSSSWSYNSEIGGLSFVGLNQIEWELFLEIFEKILSGVFEVKECRN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2296 531 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 107 398 IPR000403 -
Dere01g2296 531 Pfam Phosphatidylinositol 3- and 4-kinase 117 360 IPR000403 -
Dere01g2296 531 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 57 528 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2296 Dere-ChrDere01 37199743 37201338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2296 3 520 Acyl Lipid Metabolism Gene Families AT2G40850 50.923 2.05e-166 481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2296 01 37199743 37201338 Dere01g2296 01 37199743 37201338 ECH