Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2180 ATGGGTGTGTCGATAAATTCTCCAGAGGATGGGAATAATGGAGAGCAGGGTTCTTGGAGTTCATTGAAGTTTTTGACTAGGAGGAAGCAGGTGGATTCCACGCACAAAAACTCCGAGGGTCAGCTTGCCAAGGAGTTATCTATTCCCCATCTGATCGGAATTGGTGTCGGTGCGACAATTGGTGCTGGAGTATACGTCCTTGTTGGAACAGTTGCTCGAGAGCATTCTGGACCAGCCTTGGCTTTTTCTTTTCTCGTAGCTGGGATAGCGGCTGCTCTTTCAGCTTTTTGTTATGCAGAGCTGGCTAGTCGATGCCCTTCTGCTGGGAGTGCATATCACTATTCATACATTTGTGTCGGGGAAGGCGTTGCGTGGCTGATTGGATGGGCCTTGATACTGGAATATACAATTGGTGGAGCAGCTGTTGCTCGTGGCATATCTCCTAATATGGCTGCACTTTTTGGAGGTCCAGATAGTTTGCCTATCTTCTTAGCCCGTCAGCATATTCCTGGGACTGATATTGTTGTGGACCCATGTGCTGCAATTGTGGTATTTATTATTACTGGACTCCTGTGCGCTGGCATCAAGGAGAGCACAACGGTACAAGCCATAGTCACATCAGTGAATGTATGTGCCTTGATTTTTGTCATAGTAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCTTCAGGTTATTTTCCCTTCGGGATTGATGGAATGCTTGCCGGTTCTGCAACAGTCTTCTTTGCATATATTGGTTTTGATTCAGTTGCCAGCGCTGCCGAAGAGGTAAAAAATCCTCAGCGAGATTTGCCACTCAGTATTGGTGCTACACTGTTTCTTTCTTGTGCACTGTATATGATGGTCTCCATTGTTGTTGTTGGCTTAGTACCTTATTATGCAATCAATCCTGACACCCCTATATCCTCTGCATTTGCTAATCACGGGATGCATTGGGCGGCTTATATAGTGAATGCTGGAGCTTTTACAGCTCTCTGTTCATCATTGATGGGTGGCATACTTCCCCAGCCTCGAATTTTGATGGCTATGGCAAGGGATGGGCTGCTGCCACCATTTTTTTCAGACATTAATACGTGCAGCCAGGTTCCTGTTAAGAGCACCGTAGCTACTGGCCTTGTAGCAGCAGTTTTGGCATCTGTAATGGATGTCTCTCAACTGGCTGGGATGGTTAGTGTGGGTACGCTTCTTGCATTCACCATGGTAGCAATATCGATATTGATCCTAAGATACATCCCTCCAGATCAGGTCCCATTACCACCTTCTCTCCAGGAATCAATTGATTCAGTGTCATCACAATACTGTCGGATGAGTGACGAGAGAAATGGAAAAGATGCAGAGGCAAATATTGGTACTTCTGGAGACAGTCAACCTTTAGCTATTGAAGAGGATGCGTCAATCAACTGTCCTCTTATTTCTCAACATCTTGCCATAGGCAACTACATAAATGAAAGTAATAGGAGGCAAAATGTTGGGTGGATCATAGCACTCACATGCTTAGGGGGGTTTGTCCTCACATATGCGGCTTCAGATTTAAGTCTTCCCAGATCTTTGAGTTTCACGTTGTGTGGAATTGGTGGCACTCTTGTTCTGTCTGGTCTAGTCTTCCTAACCTTTATAGATCAAGATGATGCAAGACACAACTTTGGGCACTCTGGAGGTTTTATTTGCCCATTTGTGCCACTGCTGCCTATAGCTTGCATTCTCGTCAATTCCTACTTACTTATTAATCTTGGCACTTTTACGTGGGCTTGCGTATCTGTATGGCTTGCAATAGGAGTACTTGTTTATGCCTTTTATGGCCGAACCCACAGCTCTCTGAGAGACGCAGTTTATGTGTCTGTATCTCGTGTGGATGAAATCTATCGTAACTCCACTAGCTGTCTAGCTTAA 1929 0.4526 MGVSINSPEDGNNGEQGSWSSLKFLTRRKQVDSTHKNSEGQLAKELSIPHLIGIGVGATIGAGVYVLVGTVAREHSGPALAFSFLVAGIAAALSAFCYAELASRCPSAGSAYHYSYICVGEGVAWLIGWALILEYTIGGAAVARGISPNMAALFGGPDSLPIFLARQHIPGTDIVVDPCAAIVVFIITGLLCAGIKESTTVQAIVTSVNVCALIFVIVAGGYLGFKSGWVGYELPSGYFPFGIDGMLAGSATVFFAYIGFDSVASAAEEVKNPQRDLPLSIGATLFLSCALYMMVSIVVVGLVPYYAINPDTPISSAFANHGMHWAAYIVNAGAFTALCSSLMGGILPQPRILMAMARDGLLPPFFSDINTCSQVPVKSTVATGLVAAVLASVMDVSQLAGMVSVGTLLAFTMVAISILILRYIPPDQVPLPPSLQESIDSVSSQYCRMSDERNGKDAEANIGTSGDSQPLAIEEDASINCPLISQHLAIGNYINESNRRQNVGWIIALTCLGGFVLTYAASDLSLPRSLSFTLCGIGGTLVLSGLVFLTFIDQDDARHNFGHSGGFICPFVPLLPIACILVNSYLLINLGTFTWACVSVWLAIGVLVYAFYGRTHSSLRDAVYVSVSRVDEIYRNSTSCLA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2180 642 PIRSF AA_transporter 488 624 - -
Dere01g2180 642 PIRSF AA_transporter 21 431 - -
Dere01g2180 642 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 618 - -
Dere01g2180 642 FunFam probable cationic amino acid transporter 42 434 - -
Dere01g2180 642 Gene3D Amino acid/polyamine transporter I 42 436 - -
Dere01g2180 642 Pfam Amino acid permease 49 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dere01g2180 642 Pfam C-terminus of AA_permease 567 617 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2180 Dere-ChrDere01 35770546 35776265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2180 22 642 Organic Solute Cotransporters AT5G36940 66.296 0.0 818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2180 01 35770546 35776265 Dere01g2180 01 35770546 35776265 ECH