Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2179 ATGACGATAGTCGACTCGCAAAGCACTAAAGGCAATGGTGGTGTTGGAGGAGGAAGATGGTTACGGGAACTTGGAACTTTGGTTAGGAGAAAGCAGGTTGATTCTGTCCATTTAAGGAACTCAGAGGGTCATAAATTGGCAAGGAAGTTATCTGCTGTTGACCTCGTTGGAATTGGGGTTGGAGCTACCATAGGAGCTGGAGTGTACATTCTCGTTGGAACAGTTGCTAGAGCACATGCAGGACCAGCACTTACCATATCAATTCTCATTGCAGCAATAGCTGCTGCACTGTCAGCTTTTTGTTATGCAGAGCTTGCTTGTCGATGTCCATCTGCTGGGAGTGCTTATCACTATACATACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTTGGCTGGGCCCTGATTCTGGAGTATACAATTGGTGGTTCAGCTGTTGCTCGTGGCATAACACCAAATATGGCCTTGTTTTTTGGGGGTGAGGACAATCTGCCTTCTTTTTTGGCTCGTCATACCATCCCAGGTCTTGAAATCGTGGTTGACCCCTGTGCATCTGTCTTAATTCTTTTTGTTACCTTACTCTTGTGTATCGGAATCAAAGAGAGTTCCACAGCACAATCCATAGTGACAACAGTAAATGTCTGTGTCATGCTCTTCATCACTATAGCAGGTGGTTATCTTGGTTTCAAGACTGGATGGGTTGGATATGGGCTTCCCAGCGGGTATTTTCCGTATGGTGTAAATGGTGTGTTTTCTGGGGCAGCAATTGTTTTCTTTTCATACATTGGATTCGATTCAGTAACCAGCACAGCTGAGGAGGTGAAAAATCCTCAACGAGATTTGCCCCTTGGTATAGCAATTGCATTATTTATATGTTGCATGCTGTATATGCTTGTATCTGCAGTTATTGTTGGCTTGGTACCATTCTATGCTTTGGATCCTGATACCCCTATCTCCTCAGCATTTTCTAGCTATGGGATGGAATGGGCAGTGTATATTATAACAACTGGAGCAATCACTGCTCTCTTTGCCAGTTTGTTGGGTTCAATTCTCCCCCAGCCACGAATCTTTATGGCAATGGCTAGGGATGGTCTGCTCCCCTCATTCTTCTCAGAAATCAATAGAAGCACCCAGATCCCTGTGAAGAGCACTGTTGTTACTGGAGTCTTAGCAGCTGCTCTAGCTTTTTTTATGGATGTTTCTCAGTTAGCAGGGATGGTTAGTGTTGGAACACTGCTTGCATTCACCACTGTTGCCGTTTCAGTTTTGATACTCAGATATGTTCCACCTGATGAGATTCCTATTCCAACTTCCCTTCAAACATCCATTGACCCCATGGCTTTGCATTTTGGTGGTGATGTTGAGGAAAACACGGTCATAAGTCCTGTAGATAATGCTGTTTATCATGATCATAGCCATCAACAATTACATGATAAGGCAGCTGCCCGGCTTGAACATCCTTTAATCATAAAAGAAGTAACACAAGGCAAGAAGAATGACCAAAATAGGCGGAAACTTGCTGCATGGAGCATTGCCCTTCTATGTATAGGGATTATTATCCTTGCAAGTGCAGCTTCAGCTGAAGTGTGTCCTAGCATTCTGCGCTTCACATTTTGTGGACTGGGTGGACTACTTCTTTTGTGTAGTGTAATTGTGCTGGCCTTGATAGATCAAGATGATGCGAGGCACAGCTTTGGACACACAGGAGGGTTTGTTTGCCCATTTGTTCCATTCTTACCTGCTGCCTGTATTCTTATAAACACCTACCTATTAATTGATCTAGGGGCTTCTACATGGATTCGAGTTTCGGTTTGGTTGTTGATTGGAGCATTCATTTATATATTCTATGGCCGCTCCCATAGCTCACTGTTAAATGCAATCTATGTTCCATCAGCACGTGCCTATGAGATTCAGCGTGCTCAAGCACATCATCTAGCCTAA 1941 0.44 MTIVDSQSTKGNGGVGGGRWLRELGTLVRRKQVDSVHLRNSEGHKLARKLSAVDLVGIGVGATIGAGVYILVGTVARAHAGPALTISILIAAIAAALSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWALILEYTIGGSAVARGITPNMALFFGGEDNLPSFLARHTIPGLEIVVDPCASVLILFVTLLLCIGIKESSTAQSIVTTVNVCVMLFITIAGGYLGFKTGWVGYGLPSGYFPYGVNGVFSGAAIVFFSYIGFDSVTSTAEEVKNPQRDLPLGIAIALFICCMLYMLVSAVIVGLVPFYALDPDTPISSAFSSYGMEWAVYIITTGAITALFASLLGSILPQPRIFMAMARDGLLPSFFSEINRSTQIPVKSTVVTGVLAAALAFFMDVSQLAGMVSVGTLLAFTTVAVSVLILRYVPPDEIPIPTSLQTSIDPMALHFGGDVEENTVISPVDNAVYHDHSHQQLHDKAAARLEHPLIIKEVTQGKKNDQNRRKLAAWSIALLCIGIIILASAASAEVCPSILRFTFCGLGGLLLLCSVIVLALIDQDDARHSFGHTGGFVCPFVPFLPAACILINTYLLIDLGASTWIRVSVWLLIGAFIYIFYGRSHSSLLNAIYVPSARAYEIQRAQAHHLA 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2179 646 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 27 622 - -
Dere01g2179 646 Pfam Amino acid permease 50 432 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dere01g2179 646 Gene3D Amino acid/polyamine transporter I 45 443 - -
Dere01g2179 646 FunFam probable cationic amino acid transporter 46 438 - -
Dere01g2179 646 Pfam C-terminus of AA_permease 571 621 IPR029485 -
Dere01g2179 646 PIRSF AA_transporter 495 628 - -
Dere01g2179 646 PIRSF AA_transporter 30 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2179 Dere-ChrDere01 35753490 35761918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2179 24 646 Organic Solute Cotransporters AT3G03720 66.986 0.0 842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2179 01 35753490 35761918 Dere01g2179 01 35753490 35761918 ECH