Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2167 ATGCTGCTTTCTCAACCGCCATGTGCAAGAATATGGTTAGTGAAAATTTCAGAATTATAAGCGAGAACTGGTCTCTATACACACGATAGGACAATGGCATCTCATATTGTTGGATATCCTCGCATGGGCCCCAAGAGAGAGCTCAAGTTTGCTCTGGAGTCATTCTGGGATGGGAAGAGCAGCGCTGAGGACTTGAAAAAGGTGGCGGCTGATCTCAGGGCATCGATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACATTTTCTTGCTATGATCAGGTGCTTGATGCTACTGCCACACTTGGTGCTGTTCCGCCTAGATATGGTTGGACTGGTGGGGAGATTGGATTTGATACCTACTTCTCCATGGCCAGAGGTAATGCATCAGTACCTGCAATGGAAATGACAAAGTGGTTTGACACCAACTATCACTTTATTGTCCCTGAATTGGGACCTGATGTAAAGTTCTCTTATGCCTCACACAAGGCGGTGGACGAATACAAGGAGGCCAAAGCTCTTGGAGTAGATACCGTTCCAGTCTTGATCGGTCCTGTGTCGTACTTGTTGCTTTCCAAACCTGCCAAGGGTGTTGAGAAGACCTTTTCTCTTCTCTCTCTCCTTCCAAAAATCCTTGCTATTTACAAGGAAGTTATAGCTGATCTTAAGGCAGCTGGTGCTTCATGGATCCAGTTTGATGAACCAACCCTTGTTCTAGACCTTGACTCTCACAAGCTGCAAGCATTTACTGAAGCATACTCAGAACTTGAATCTTCTTTATCTGGCTTGAATGTTCTTATTGAGACCTACTTTGCTGACATTCCTGCTGATGCTTACAAGACCCTCACTTCTCTCAAGGGTGTCACTGCATATGGATTTGATTTTGTCCGTGGAACTAAGACCCTTGATTTGATCAAGGGTGGGTTTCCCAGCGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCTAATGATCTTGCTGGTTCTCTCAGTGTATTAAAGGAACTTGAGGGCATTGTTGGCAAAGATAAACTTGTTGTGTCCACCTCCTGTTCGCTTCTTCACACTGCTGTTGATCTTGTTAATGAGACCAAGCTGGATAATGAGATCAAGTCATGGCTAGCTTTTGCCGCTCAAAAAATTGTTGAAGTTAATGCATTGGCCAAGGCATTGTCTGGTGCAAAAGATGAGGACTTCTTCTCTGCTAATGCTGCTGCTCAGGCTTCAAGGAAGTCCTCTCCAAGAGTGACAAATGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCTGACCACCGCCGTGCCACTAATGTCAGTGCCAGGCTGGATGCTCAACAAAAGAAGCTTAACCTTCCAATCCTCCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAGCTGAGGAGGGTACGCCGTGAATACAAGGCTAACAAGATCTCCGAGGAAGAGTATGTTAAGGCAATCAAGGAGGAAATCCGCAAAGTTGTTGAACTCCAAGAAGAGCTTGATATTGATGTCCTGGTACATGGGGAGCCAGAGAGAAACGATATGGTTGAGTACTTTGGTGAGCAATTGTCTGGCTTTGCCTTCACTGTCAATGGGTGGGTGCAATCTTATGGATCTCGTTGCGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAACCCATGACTGTGTTCTGGTCATCTACTGCTCAGAGCATGACCAAGCGCCCAATGAAGGGAATGCTTACTGGTCCCGTCACCATTCTGAACTGGTCCTTTGTTAGAAACGACCAGCCTAGATCTGAGACTTGCTATCAGATTGCCTTGGCTATCAAGGATGAAGTGGAAGATCTTGAGAAGGCCGAAATCAATGTTATCCAAATTGATGAGGCTGCTTTGAGAGAGGGTTTGCCTCTAAGGAAGTCAGAGCAAGCTCACTACCTGGACTGGGCTGTCCACTCCTTCAGGATCACCAACGTTGGTGTGCAGGACACCACTCAGATCCACACCCACATGTGCTATTCCAACTTCAACGACATCATTCACTCAATCATTGACATGGATGCCGATGTGATCACCATTGAGAACTCTCGTTCTGATGAAAAGCTTCTCTCAGTTTTCCGTGAAGGAGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCCAGGATACCACCAACTGAGGAAATTGCCGACAGGATCAACAAGATGCTTGCAGTGCTGGAGAAGAACATCTTGTGGGTCAACCCAGATTGTGGGCTCAAAACTCGCAAGTACACTGAGGTGAAGCCAGCTCTCACCAACATGGTTGCTGCTGCTAAACTCATCCGCAACGAGCTCGCCTCTGCCAAGTAA 2391 0.4709 MLLSQPPCARIWLVKISELXARTGLYTHDRTMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQMADAGIKYIPSNTFSCYDQVLDATATLGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVDEYKEAKALGVDTVPVLIGPVSYLLLSKPAKGVEKTFSLLSLLPKILAIYKEVIADLKAAGASWIQFDEPTLVLDLDSHKLQAFTEAYSELESSLSGLNVLIETYFADIPADAYKTLTSLKGVTAYGFDFVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAGSLSVLKELEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDNEIKSWLAFAAQKIVEVNALAKALSGAKDEDFFSANAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKANKISEEEYVKAIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDLEKAEINVIQIDEAALREGLPLRKSEQAHYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELASAK 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2167 796 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 32 791 IPR006276 GO:0003871|GO:0008270|GO:0009086
Dere01g2167 796 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 32 796 - -
Dere01g2167 796 Coils Coil 491 511 - -
Dere01g2167 796 CDD CIMS_C_terminal_like 464 787 IPR002629 GO:0003871|GO:0008270|GO:0009086
Dere01g2167 796 Pfam Cobalamin-independent synthase, N-terminal domain 34 346 IPR013215 GO:0003871|GO:0008270|GO:0008652
Dere01g2167 796 SUPERFAMILY UROD/MetE-like 428 790 IPR038071 -
Dere01g2167 796 PIRSF Met_synth_MetE 31 796 IPR006276 GO:0003871|GO:0008270|GO:0009086
Dere01g2167 796 NCBIfam 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 37 790 IPR006276 GO:0003871|GO:0008270|GO:0009086
Dere01g2167 796 Gene3D - 421 789 IPR038071 -
Dere01g2167 796 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 36 425 - -
Dere01g2167 796 SUPERFAMILY UROD/MetE-like 34 426 IPR038071 -
Dere01g2167 796 CDD CIMS_N_terminal_like 34 398 - -
Dere01g2167 796 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 426 789 - -
Dere01g2167 796 Gene3D - 36 556 IPR038071 -
Dere01g2167 796 Pfam Cobalamin-independent synthase, Catalytic domain 463 786 IPR002629 GO:0003871|GO:0008270|GO:0009086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2167 Dere-ChrDere01 35642112 35647680 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2167 01 35642112 35647680 Dere01g2167 01 35642112 35647680 ECH