Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2159 ATGTGATCTCGTCCTCTGGAATCGGTGATAGACAACAATCAATTGTATAGGAAGTTGGGGAAAATGGCTAAAATTCTCATCTTCTTGGCGGGGCTTTGGCTGTTAGGTGGCTGGGCATACCTGTCAGAGCCAAAATACGTGAAGTATAAAGACCCAAAACAGTCAATTGATGCTCGGGTCATGGATCTTATAAGCAACATGACTCTCAAGGAGAAAATTGGCCAAATGTTGCAAATTGAGCGCAAGTTTGCTTCTGCCGAGTTGCTCAAGAAATATTTCATTGGGGGTGTAATGAGTGAGGGAGGGAGTCTTCCTGCTCCGCAGGCTTCAGCTGAAGCTTGGGTTGACATGGTTAATGATTTTCAAAAGGGTGCTTTATCAACTCGGCTTGCTATCCCAATGATTTATGGAATCGACGCTGTTCATGGCCATAACAGTGTTTACCGAGCGACTATCTTTCCCCACAACATTGGACTTGGAGCAACCAGGGACCCAGAACTTGTGAAGCGAATTGGAGTTGCCACTGCCCTTGAAGTTCGAGCTACTGGAATACCATATGTTTATGCACCCTGTATAGCAGTATGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTATAGTGAAGATCCTAAAGTAGTACAAGAGATGACTGAAATAATATCAGGGTTGCAAGGGGATATTCCTGATAATTTACCCAAGGGTATCCCTTTCATTGATGGAAAAGAAAAGGTTATAGCATGTGCTAAGCACTATGTGGGTGATGGTGGAACAATTAATGGGATTGATGAGAACAACACAATGATAGATAGAGATGGATTGATGCGAATTCACATGCCTGGCTACTTGGTCTCAATTAGCAAGGGTGTGGCAACAATCATGGTCTCATACTCAAGTTGGAATGGAGTAAAAATGCACACTAACCACGATCTCATCACTGGCTTCCTTAAAAATACACTTCATTTCAAGGGCTTTGTTATCTCGGACTTTGAGGGTATTGACAGGATCACCTCCCCACCTCGTACAAATTATATCAATTCTATTGAAGCAGCAGTTAATGCTGGCATTGACATGTTCATGGTTCCAAAGAACTATACAGAATTCATAGATGATGTAATTAAACTGGTGAGAAATAAAGTCATTCCTATGACTCGAATTGACGATGCAGTGAAAAGAATTTTGTCAGTTAAGTTTATGATGGGTCTTTTTGAGAATCCGTTGGCTGATTACAGCTTGGTCAAGTATCTTGGAAATCAGGAGCATAGAGAAATAGCTAGAGAGGCTGTACGGAAGTCAATGGTCCTACTAAAAAATGGTAAGTCTGCCGGTGGGCCACTACTACCTCTTCCTAAACGGGCGCCAAAAATACTTGTAGCTGGAAGTCACGCAGATGATTTAGGCTATCAGTGTGGTGGCTGGACCATTGAGTGGCAAGGAGTCAAAGGAAGCAGTCTTCTTAAAGGGACTACAATTCTCTCTGCTATAAAAAACACAGTTGATCCAGAGACCGAAGTGATCTACAAGGAGAACCCTGATGTAGAATATATCAAGTCCAATGAATTCTCCTATACCATAGTTGTAGTAGGAGAGCATCCTTATGCTGAATGGCATGGTGACAGCATGAACCTGACGATCCCTTACCCTGGCCCCGAGACCTTAAAAAATGTTTGTGGAGTCACAAAATGCGTGGTTGTCATAATCTCTGGCCGCCCTGTTGTTATCGAACCATATGTTGCTTTAATAGATGCTCTTGTTGCTGCTTGGCTTCCGGGAAGTGAAGGCCAGGGTGTGGCCGATGTTTTGTTTGGTGACTATGGTTTCACAGGAAAGCTTCCACGAACATGGTTCAAAAGTGTTGATCAACTGCCCATGAATGTCGGAGATCCTCATTATGATCCCCTCTTCCCATATGGGTTTGGCCTTTCTACCAAACCAACTGAGGCCATTTATACCTCGTAG 1959 0.4329 MXSRPLESVIDNNQLYRKLGKMAKILIFLAGLWLLGGWAYLSEPKYVKYKDPKQSIDARVMDLISNMTLKEKIGQMLQIERKFASAELLKKYFIGGVMSEGGSLPAPQASAEAWVDMVNDFQKGALSTRLAIPMIYGIDAVHGHNSVYRATIFPHNIGLGATRDPELVKRIGVATALEVRATGIPYVYAPCIAVCRDPRWGRCYESYSEDPKVVQEMTEIISGLQGDIPDNLPKGIPFIDGKEKVIACAKHYVGDGGTINGIDENNTMIDRDGLMRIHMPGYLVSISKGVATIMVSYSSWNGVKMHTNHDLITGFLKNTLHFKGFVISDFEGIDRITSPPRTNYINSIEAAVNAGIDMFMVPKNYTEFIDDVIKLVRNKVIPMTRIDDAVKRILSVKFMMGLFENPLADYSLVKYLGNQEHREIAREAVRKSMVLLKNGKSAGGPLLPLPKRAPKILVAGSHADDLGYQCGGWTIEWQGVKGSSLLKGTTILSAIKNTVDPETEVIYKENPDVEYIKSNEFSYTIVVVGEHPYAEWHGDSMNLTIPYPGPETLKNVCGVTKCVVVIISGRPVVIEPYVALIDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPYGFGLSTKPTEAIYTS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2159 652 Gene3D - 43 417 IPR036962 GO:0004553|GO:0005975
Dere01g2159 652 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 433 642 IPR036881 GO:0004553|GO:0005975
Dere01g2159 652 Pfam Glycosyl hydrolase family 3 N terminal domain 68 396 IPR001764 GO:0004553|GO:0005975
Dere01g2159 652 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 45 647 - -
Dere01g2159 652 PRINTS Glycosyl hydrolase family 3 signature 199 215 IPR001764 GO:0004553|GO:0005975
Dere01g2159 652 PRINTS Glycosyl hydrolase family 3 signature 153 172 IPR001764 GO:0004553|GO:0005975
Dere01g2159 652 PRINTS Glycosyl hydrolase family 3 signature 245 261 IPR001764 GO:0004553|GO:0005975
Dere01g2159 652 PRINTS Glycosyl hydrolase family 3 signature 315 333 IPR001764 GO:0004553|GO:0005975
Dere01g2159 652 PRINTS Glycosyl hydrolase family 3 signature 129 145 IPR001764 GO:0004553|GO:0005975
Dere01g2159 652 SUPERFAMILY (Trans)glycosidases 46 432 IPR017853 -
Dere01g2159 652 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 42 417 - -
Dere01g2159 652 Gene3D - 418 644 IPR036881 GO:0004553|GO:0005975
Dere01g2159 652 FunFam Glycosyl hydrolase family protein 418 644 - -
Dere01g2159 652 Pfam Glycosyl hydrolase family 3 C-terminal domain 433 642 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2159 Dere-ChrDere01 35561821 35565791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2159 18 645 Glycoside Hydrolase AT5G20950 67.994 0.0 880
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2159 01 35561821 35565791 Dere01g2159 01 35561821 35565791 ECH