Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2129 ATGGCTTTGGCATCGCAAGGTAAGGGTTCCTACGACACTGACCCGAACCAGGTAATTCAAAATGGGTCGCTCCAAGAACGAGTCGCGATTGTGACCGGTGCATCCCGCGGAATCGGTCGAGAGATTGCACTTCATCTGGCTTCACTCGGAGCCAGAATCGTGGTTAATTACACCTCCAACTTGGCCCAGGCTGAGTCAGTTGCTGCTCAGATCAATTCCTCCTCCCCTGACGGGGGAAATCCACGGGCCATCGTCGTCCGGGCCGATGTTTCCGATCCGACTCAGGTGAAGTCTCTCTTCGATGAGGCTGAGAAGGTCTTCAACTCGCCGGCTCATATCCTCGTCAATTCAGCTGGAGTTCTTGACAGCAAATACCCTTCTATAGCCAATACTTCTTTGGAGAACTTTGATTACATTTTCAGGGTGAATGCCAGAGGGGCATTCATGTGCTGTAAAGAGGCAGCAAACCGTTTGAAACGTGGGGGTGGAGGTCGAATTATAATGTTATCTACATCAATGGTGGGTGCACTGAGACCAGGTTTTGGAGTATACGCAGCATCCAAAGCAGCTGTAGAGACAATGGTGAAGATTTTAGCGAAAGAGCTGAAGGGAACGGGAATTACTGCTAACTGTATTGCACCAGGGCCAATTGCAACAGAGATGTTTTTTAGTGGGAAGACTGAAGAGCAGGTGAAGGCGGCAATTGAAGAGTCTCCGCTATGTAGGCTTGGCGAGACCAAGGATGTAGCCCCGGCGGTGGGGTTCTTGGCCACCGACGCTGGCGAGTGGGTCAATGGTCAGGTTATTCGTGTCAATGGCGGCTATGTCTAA 831 0.5114 MALASQGKGSYDTDPNQVIQNGSLQERVAIVTGASRGIGREIALHLASLGARIVVNYTSNLAQAESVAAQINSSSPDGGNPRAIVVRADVSDPTQVKSLFDEAEKVFNSPAHILVNSAGVLDSKYPSIANTSLENFDYIFRVNARGAFMCCKEAANRLKRGGGGRIIMLSTSMVGALRPGFGVYAASKAAVETMVKILAKELKGTGITANCIAPGPIATEMFFSGKTEEQVKAAIEESPLCRLGETKDVAPAVGFLATDAGEWVNGQVIRVNGGYV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2129 276 CDD THN_reductase-like_SDR_c 24 276 - -
Dere01g2129 276 FunFam Short-chain dehydrogenase reductase 15 276 - -
Dere01g2129 276 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 27 215 - -
Dere01g2129 276 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 26 275 IPR036291 -
Dere01g2129 276 PRINTS Glucose/ribitol dehydrogenase family signature 109 120 IPR002347 -
Dere01g2129 276 PRINTS Glucose/ribitol dehydrogenase family signature 158 174 IPR002347 -
Dere01g2129 276 PRINTS Glucose/ribitol dehydrogenase family signature 28 45 IPR002347 -
Dere01g2129 276 PRINTS Glucose/ribitol dehydrogenase family signature 184 203 IPR002347 -
Dere01g2129 276 PRINTS Glucose/ribitol dehydrogenase family signature 205 222 IPR002347 -
Dere01g2129 276 PRINTS Glucose/ribitol dehydrogenase family signature 239 259 IPR002347 -
Dere01g2129 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 172 IPR002347 -
Dere01g2129 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 203 IPR002347 -
Dere01g2129 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 120 IPR002347 -
Dere01g2129 276 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 16 274 - -
Dere01g2129 276 Gene3D - 11 276 - -
Dere01g2129 276 Pfam Enoyl-(Acyl carrier protein) reductase 33 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2129 Dere-ChrDere01 35226372 35229078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2129 12 274 Acyl Lipid Metabolism Gene Families AT1G24360 32.830 2.49e-29 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2129 01 35226372 35229078 Dere01g2129 01 35226372 35229078 ECH