Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2125 ATGGTCAACACCAAAATGTGGATCGTCTCTTGGCAAGTTTTGGAAGAAATTCCCTTGATTTGCAGACTCAGGAGTGTTCGGATTTCCATAATATTCAGAGCTACTGTCAGACTAAGCTATACCTCTGGCTATAATTTTCTGAGTGGCCATAATAGAACAAAACCTATAGAACAGGTCAGATCACCCACGGACAGCAAGAAGAAAAAGGAACCCCAAGGAAAACACACAAAGCAAGAAGAAAAGACAAAAAAGAAAAATAAAATTTTCCAAAAGACGAAGAAAGAGACGCAACATAAGAAGACAAGGGCACAACTAGAAAAAGTAGAATGGGACCAGAACAGCTACATGCAAGTCCATAACAAGGAAGAGGGTGTTAAAGAGCGTAAGAAAATCAGAACAAACCATACATGCAGTGAACTAGAACAGCGAAAAGCAGAGAAAAAGCGTGCTTCCATGGTGGAAACTATATTAAAAGAGAGGCTGGACAAGTTTGAGAAGAAAGGTACTTGTTTGCCAATTGCAAGGTCAAGGAGAGTAAAGGGGATGGCACAGTTTACTTCTCAGGGTCGCTTGAAGATGCTTTTTAATGGTGAGGGATTCTCATTTCCTTTGGAACAAAAGGACCCGTTTCACAGATCAATTCAGAGCCATAAGCGAAAGGTACGGTGTATTAGTTCTTCTTCATCGTACTTAAGTTGTAAAACGAACCGTTACAATGCGGAGGCCCTCTCCAGTCCCACTTTTAGCAATGGCAGTGTGCACAGTGAACATTATTCTGATCATGATGATTATGAGTTTGAGAACGACAGCTTGGCTTGTTTCAGAGGTCTGGTGTTGGATTTATCATACAGGCCAGTCAATGTTGTAGGCTGGAAACGTGCTATATGTTTGGAGTTTATGGAGAAGGCTGACGTACTAGAGTATTATGATCAGACAGTGAACTCCCCTAGTGGATCTTTCTATATACCTGCTGTCTTAAGGGTTCCTAATCTACTTCAGGTTGTTAAAAGAAGAGTTGTCAAGAGCAATCTTACCAGGAAGAATATACTATTTCGGGACAATTACACTTGTCAATATTGCTCTTCACGTGAGAATTTGACCATTGACCATGTATTGCCTGCTGCACTGGGTGGAGAATGGAAATGGGAAAATTTAGTTACTGCTTGTGCCAAATGCAATTCAAGGAAAGGTCAAAAAACTGTAGAGGAAGCAAAAATGAAGCTGATTAAGTTTCCAAAGGCCCCAAAGGACTATGACATACTTGCCATACCCCTAACCAGTTCAGCGCTGCGAATGTTGACGAAAAGAAAGGGAACACCTGAAGAGTGGCGCCAGTATCTATCAAGGAAAATGCAGCAAGTGTATGCGTGGTCGCTTACAGGCACAGAAACTGATGATGCTCCCCTCATTCGTTTTCAAGTACTTGGGCGGTTTCCGAAGTGGCTACTTGTTCATTTCAAACTGTGCTTGGGTGGATAA 1479 0.4178 MVNTKMWIVSWQVLEEIPLICRLRSVRISIIFRATVRLSYTSGYNFLSGHNRTKPIEQVRSPTDSKKKKEPQGKHTKQEEKTKKKNKIFQKTKKETQHKKTRAQLEKVEWDQNSYMQVHNKEEGVKERKKIRTNHTCSELEQRKAEKKRASMVETILKERLDKFEKKGTCLPIARSRRVKGMAQFTSQGRLKMLFNGEGFSFPLEQKDPFHRSIQSHKRKVRCISSSSSYLSCKTNRYNAEALSSPTFSNGSVHSEHYSDHDDYEFENDSLACFRGLVLDLSYRPVNVVGWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPNLLQVVKRRVVKSNLTRKNILFRDNYTCQYCSSRENLTIDHVLPAALGGEWKWENLVTACAKCNSRKGQKTVEEAKMKLIKFPKAPKDYDILAIPLTSSALRMLTKRKGTPEEWRQYLSRKMQQVYAWSLTGTETDDAPLIRFQVLGRFPKWLLVHFKLCLGG 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2125 492 SMART HNH_5 344 394 IPR003615 -
Dere01g2125 492 Gene3D - 332 420 - -
Dere01g2125 492 MobiDBLite consensus disorder prediction 51 103 - -
Dere01g2125 492 CDD HNHc 346 397 IPR003615 -
Dere01g2125 492 MobiDBLite consensus disorder prediction 57 86 - -
Dere01g2125 492 Pfam HNH endonuclease 357 408 IPR029471 -
Dere01g2125 492 PANTHER SLL1193 PROTEIN 269 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2125 Dere-ChrDere01 35180736 35193781 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2125 01 35180736 35193781 Dere01g2125 01 35180736 35193781 ECH