Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2117 ATGAATGAAAGCACCTACTTGATGCCACGTGTTAGAGAGTGTGAAGTGCACGTCACGCGCATTCCCCGTTGTATTCGCTGCCTACCACACATCACTCTGACGAGTCTAATTTTCGTTTCTTGTTTATTTCCCTCGTTCCTCCTTGTCTCGCTTTCTTACTTTAAAGTCAAATTAGAAGTGGGATTTCGTATCGTTGTAGAGTCTGGAAATACAATGGCGAAGGTTTTGAATCAGACTGGTTCGATTTCAACTTTTCATGACGATATACAACAACATCGTCGCAAAGTTTCTGTGTATCCCAATGCTCGTTGCCACATTTCTGGGGTTTTTTGCCCCGTGAAGAGGTTTCCTTCTCTGAAACTAAAATCCCAGGTTCTCAGATCTTCATCCTTTATGTCTTCTGAATTCAATGGCAAAAAGCTTGTCTTTCCCGAGTATAAACTCATTCCCAACAGAGGGAAATCGCTTTCTCGATCTTCAGCTGCAGCTCAGATGGCCCTTAGAATAGGTAAAGCTCAGAAGTGGTGGGAAATAGGGCTTCAACCCAATATGAGGGAGGTGACTTCGGCACAAGACCTTGTGGACTCCCTGTTGAACGCAGGGGACAAGCTGCTGGTTGTTGATTTCTTCTCTCCTGGTTGTGGTGGTTGCAGAGCCCTCCATCCTAAGCTATGTCAATTGGCAGAGATGAACCCAGATGTTCTATTCCTTCAAGTGAATTATGAGGAGCATAAATCTATGTGTTATAGTCTTAACGTTCACGTCCTTCCCTTCTTCCGCTTCTATAGAGGGGCCCATGGTCGTTTATGCAGCTTTAGCTGTACCAATGCCACGATCAAAAAGTTCAAAGATGCACTGGCCAAACACACCCCTGATAGATGCAGCTTGGGTCCAACCAAAGGGTTGGAGGAGAAAGAGCTCTTAGCTCTGTCTGCAAATAAAGATCTGTCCTTCACTTACACACCAAAACCAGTTGAAGCTGAGGAAGATGCCCCTGCACAGCCATCTCCTCCTAGTCCGAAGCCCCTTCCATTACCTTCAGCGAGTCCCAAGTCTCCTGAGTTGGACAAGGAGAGAAGCCCGAGCACTGCTTGGAGATGA 1101 0.4614 MNESTYLMPRVRECEVHVTRIPRCIRCLPHITLTSLIFVSCLFPSFLLVSLSYFKVKLEVGFRIVVESGNTMAKVLNQTGSISTFHDDIQQHRRKVSVYPNARCHISGVFCPVKRFPSLKLKSQVLRSSSFMSSEFNGKKLVFPEYKLIPNRGKSLSRSSAAAQMALRIGKAQKWWEIGLQPNMREVTSAQDLVDSLLNAGDKLLVVDFFSPGCGGCRALHPKLCQLAEMNPDVLFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTKGLEEKELLALSANKDLSFTYTPKPVEAEEDAPAQPSPPSPKPLPLPSASPKSPELDKERSPSTAWR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2117 366 ProSiteProfiles Thioredoxin domain profile. 156 291 IPR013766 -
Dere01g2117 366 Pfam Thioredoxin 195 266 IPR013766 -
Dere01g2117 366 SUPERFAMILY Thioredoxin-like 173 289 IPR036249 -
Dere01g2117 366 PANTHER THIOREDOXIN, MITOCHONDRIAL 155 322 - -
Dere01g2117 366 FunFam Thioredoxin-like 1-2, chloroplastic 173 291 - -
Dere01g2117 366 Gene3D Glutaredoxin 179 294 - -
Dere01g2117 366 MobiDBLite consensus disorder prediction 352 366 - -
Dere01g2117 366 MobiDBLite consensus disorder prediction 331 349 - -
Dere01g2117 366 CDD TRX_family 200 264 - -
Dere01g2117 366 MobiDBLite consensus disorder prediction 321 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2117 Dere-ChrDere01 35120584 35122752 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2117 01 35120584 35122752 Dere01g2117 01 35120584 35122752 ECH