Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2058 ATGGCAAGTGCTTTGCAGCTTTGCTGGGCTAAAAGCACCTTCTCGGTGACTTCTTGGAGAAGTTTGCATTGCCAACCTCTGTTGTCTCGGCGAATTGGTTTTGCCGCATCTGTTACTTCTGTTTCCGGGTTATGTTGTACTAGAAGAGTCTCAAGTGAAAAGGTGGCCTTCAGTTTCTGCTGCAAAGCAGCAAAAAGTGATTTACTTGTGAAGGATGAGACTGAAAATCAGAGCTATCGAGAAACGGACAAACAATTCACTTGCGTCATGAAGTTTGGTGGCTCATCGGTGGCTACTGCAGCGAGGATGAAAGAGGTTGCTAACCTTATAATAAGTTTTCCCGAAGAGAGTCCTATAATCGTTCTGTCTGCGATGGGAAAGACAACTAACAAGCTTTTACTGGCTGGAGAAAAAGCCGTTGGCTGCGGTGTTACCAATGTCTCATGTCTTGATGAGCTCAGCTTTATAAAAGACCTGCATCTCAGGACTGTGGATGAGCTTGAAGTGGACAGATCTGTTATTGCAAGGCATCTAGAAGAATTGGAGCAACTTCTGAAGGGGATTGCTATGATGAAAGAGTTGACTCTGCGGACTAAAGACTATTTAGTTTCGTTTGGAGAGTGCATGTCCACTAGGATCTTCACTGCATATCTAAATAAAATGGGTGTTAAAGCTCGCCAATATGATGCATTTGAGATTGGTTTTATAACCACTGATGACTTCACAAATGCGGATATTTTGGAAGCAACTTATCCAGCTGTTGCAAAGAGATTATGTAGTGATTGGGTTTCTGACCCTGCAATACCAATTGTAACAGGCTTCCTTGGAAAGGGTCGGAAATCATGTGCAGTAACGACACTGGGTAGAGGGGGTAGTGATTTGACGGCTACAACAATTGGTAAAGCGCTAGCATTGCCTGAAATCCAGGTATGGAAAGATGTTGATGGTGTTTTAACTTGTGATCCAAATATATGCCCACAAGCAGAACCTGTCCCATATTTGACATTTGACGAGGCTGCTGAACTTGCTTACTTTGGTGCTCAGGTCCTACATCCACAGTCTATGAGACCTGCCAGAGAAGGTGATATTCCTGTGAGGGTTAAAAATTCTTACAATTCAAAAGCACCAGGTACCCTCATCACCAAGACAAGAGATATGAGCAAGGCAGTATTAACTAGCATTGTTTTGAAACGTAATGTGACCATGTTGGATATTGTAAGCACTCGTATGCTTGGTCAATATGGCTTTCTTGCTAAGGTCTTTTCAACTTTTGAAGAATTAGGAATATCAGTAGATGTTGTTGCTACAAGTGAAGTCAGTGTTTCCTTGACATTAGATCCATCAAAGCTATGGAGCAGAGAGCTAATCCAGCAGGAGCTTGACTATGTCGTTGAAGAACTGGAGAAAATTGCTGTGGTAGATCTCCAACAGAATAAATCTATCATATCTCTCATTGGAAATGTTCAGAGATCTTCGTTGATATTGGAGAAGGCATTTCATGTTCTCCGAACCCTTGGGGTCACTGTTCAGATGATCTCTCAGGGTGCATCTAAGGTGAATATCTCGTTGGTTGTAAACGACAGTGAAGCGGAGCAGTGTGTCAGAGCTCTCCACGCAGCCTTCTTTGAGAGTCAGCTCTCTGAGTTAGAGAAACAATACGTATCTGGAAATGGTTCTGTTCCTGCATTATCATAG 1695 0.4277 MASALQLCWAKSTFSVTSWRSLHCQPLLSRRIGFAASVTSVSGLCCTRRVSSEKVAFSFCCKAAKSDLLVKDETENQSYRETDKQFTCVMKFGGSSVATAARMKEVANLIISFPEESPIIVLSAMGKTTNKLLLAGEKAVGCGVTNVSCLDELSFIKDLHLRTVDELEVDRSVIARHLEELEQLLKGIAMMKELTLRTKDYLVSFGECMSTRIFTAYLNKMGVKARQYDAFEIGFITTDDFTNADILEATYPAVAKRLCSDWVSDPAIPIVTGFLGKGRKSCAVTTLGRGGSDLTATTIGKALALPEIQVWKDVDGVLTCDPNICPQAEPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNSKAPGTLITKTRDMSKAVLTSIVLKRNVTMLDIVSTRMLGQYGFLAKVFSTFEELGISVDVVATSEVSVSLTLDPSKLWSRELIQQELDYVVEELEKIAVVDLQQNKSIISLIGNVQRSSLILEKAFHVLRTLGVTVQMISQGASKVNISLVVNDSEAEQCVRALHAAFFESQLSELEKQYVSGNGSVPALS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2058 564 PANTHER ASPARTATE KINASE 86 544 - -
Dere01g2058 564 ProSiteProfiles ACT domain profile. 405 480 IPR002912 -
Dere01g2058 564 SUPERFAMILY ACT-like 389 487 IPR045865 -
Dere01g2058 564 Gene3D Aspartokinase, catalytic domain 126 222 IPR042199 -
Dere01g2058 564 ProSitePatterns Aspartokinase signature. 89 97 IPR018042 GO:0004072|GO:0008652
Dere01g2058 564 NCBIfam aspartate kinase 88 543 IPR001341 GO:0004072|GO:0008652
Dere01g2058 564 Gene3D - 89 380 IPR036393 -
Dere01g2058 564 SUPERFAMILY Carbamate kinase-like 89 382 IPR036393 -
Dere01g2058 564 Coils Coil 164 184 - -
Dere01g2058 564 Gene3D - 392 542 - -
Dere01g2058 564 FunFam Aspartokinase 193 380 - -
Dere01g2058 564 FunFam Aspartokinase 1 474 542 - -
Dere01g2058 564 CDD AAK_AK-LysC-like 87 381 IPR041746 -
Dere01g2058 564 Gene3D - 401 476 - -
Dere01g2058 564 Pfam Amino acid kinase family 87 369 IPR001048 -
Dere01g2058 564 SUPERFAMILY ACT-like 473 553 IPR045865 -
Dere01g2058 564 FunFam Aspartokinase 126 222 - -
Dere01g2058 564 FunFam Aspartokinase 401 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2058 Dere-ChrDere01 34571807 34577004 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2058 01 34571807 34577004 Dere01g2058 01 34571807 34577004 ECH