Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2056 ATGCCCCAATCCCAAAGGGATCCCCAAAGTGGGAATGGGGTTTCTCCCACTTCTCCGAAGGAAAGCCCTCTCTTCCCTACGACGAGAATCGCAGACCAGATCGAGCTTCCTGCAACTCCGTCATTGTCGGCGACCATCCATTGTTCTTGGCGTCTTCTGGAAGAATACCGAAAGAATGGTAAATATTTGCTACTGTGCGATGCTGTTGCTGGCTTTTCTTTCGTAGTGGCTACACATGGGTTTTGTTCTGCCAAACCGGAGTTTGGCCATTGTATTGGAAGTACAAAACATTGTTTACTTCTTGCTGGTTGGATCAATCTGATATGCCATCCTTTGCATCTGACCGATCTTCAACACCGGCATGCTCAGAACATTAGCAAGATATTAATGTGTAAATCTGAGGTCTGTTTACAATCAGTTCTTTTTGGTTTTTGCTGTATGTTTTCCAGAGAGTTCAAGTTCACGAGCTTTATCAATGATGTGCTCCAAAAGCACAGCAGATTCTATGCAACGGTTGGTGGAAGAAGGCTAGACGGAAAGGTGGCTTTGATAACTGGGTCAGCAAGTGGACTTGGCAAGGCCACGGCCCATGAATTTGTCCAACACGGGGCCCAAGTCATCATTGCTGACAGAGACACTCTTCTCGGGCCACAAGTTGCCAATGAACTCGGCCCATCAGCCCACTTCGTGGAATGCGACGTCGCCAATGAGGCCCAAGTCGCAGAAGCAGTAAATGTCGCCATGGCCCGCCACGGAAAACTAGACATAATGTACAACAATGCCGGGATAACAGGCCCGAGTATCCCACCAAGCATCACTGAGCTGAACCTCGATGACTTTGATCAGGTCATGCGAATCAACGTCCGTGGCACAATCGCTGGCATAAAGCATGCGGCCCGAGTCATGATACCCATGGGCTCAGGGTCCATTCTGTGTACATCAAGCATAAGTGGGCTTATGGGTGGGCTTGGGCCACATCCGTACACAATATCTAAATTTACAATACCAGGCATAGTGAAGTCTGTGGCTAGCGAACTGTGCAGAAGTGGGATCAGAGTCAATTGCATATCCCCAGCTCCAATTCCTACGCCAATGTCGTTGACCCAGATAGGGAAGTTTTTCCCGGGCTTAACCCAAGAGCAGGTAACTGAAATAGTGAATGGGCTTGGTGAGCTAGAAGGAGCCAAGTGTGAGGAAATAGATGTGGCTCGGGCTGCTTTGTACTTGGCCTCTGATGAAGCTAAATATATTACGGGTCATAACCTCGTCGTGGATGGAGGGTTTACCTGCTTTAAAAATCTCAAGTTCCCTTCGCCTTGTGATATTGCTTAA 1332 0.4827 MPQSQRDPQSGNGVSPTSPKESPLFPTTRIADQIELPATPSLSATIHCSWRLLEEYRKNGKYLLLCDAVAGFSFVVATHGFCSAKPEFGHCIGSTKHCLLLAGWINLICHPLHLTDLQHRHAQNISKILMCKSEVCLQSVLFGFCCMFSREFKFTSFINDVLQKHSRFYATVGGRRLDGKVALITGSASGLGKATAHEFVQHGAQVIIADRDTLLGPQVANELGPSAHFVECDVANEAQVAEAVNVAMARHGKLDIMYNNAGITGPSIPPSITELNLDDFDQVMRINVRGTIAGIKHAARVMIPMGSGSILCTSSISGLMGGLGPHPYTISKFTIPGIVKSVASELCRSGIRVNCISPAPIPTPMSLTQIGKFFPGLTQEQVTEIVNGLGELEGAKCEEIDVARAALYLASDEAKYITGHNLVVDGGFTCFKNLKFPSPCDIA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2056 443 PRINTS Glucose/ribitol dehydrogenase family signature 349 366 IPR002347 -
Dere01g2056 443 PRINTS Glucose/ribitol dehydrogenase family signature 392 412 IPR002347 -
Dere01g2056 443 PRINTS Glucose/ribitol dehydrogenase family signature 181 198 IPR002347 -
Dere01g2056 443 PRINTS Glucose/ribitol dehydrogenase family signature 252 263 IPR002347 -
Dere01g2056 443 PRINTS Glucose/ribitol dehydrogenase family signature 302 318 IPR002347 -
Dere01g2056 443 PRINTS Glucose/ribitol dehydrogenase family signature 328 347 IPR002347 -
Dere01g2056 443 Gene3D - 169 436 - -
Dere01g2056 443 FunFam Short-chain dehydrogenase reductase 167 433 - -
Dere01g2056 443 Pfam Enoyl-(Acyl carrier protein) reductase 186 429 - -
Dere01g2056 443 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 328 347 IPR002347 -
Dere01g2056 443 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 308 316 IPR002347 -
Dere01g2056 443 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 252 263 IPR002347 -
Dere01g2056 443 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 175 432 - -
Dere01g2056 443 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 430 IPR036291 -
Dere01g2056 443 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2056 Dere-ChrDere01 34512590 34520035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2056 177 429 Acyl Lipid Metabolism Gene Families AT1G63380 30.303 2.24e-23 97.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2056 01 34512590 34520035 Dere01g2056 01 34512590 34520035 ECH