Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2040 ATGGGGTGCACTTACTCTGTACACGCACTTGGGAAGAAGAAGAAGAAGACAATTATCCCTGAAGTGGTGGTCTTTGTTCCATCCACCCCAATTCCTGTACAATCTGATCTCCAGAGGGCGCTTAGAGGGCTAGTTCCACGGGATCTTGCTGACAGATTATCTTCTCTTCGGAATCAGATAGTGTTAGTGGCTGAGGATACTGGGGGATCTGCAATAGCGGAATTGCGGCGAGCTCTGAATGAATACTTGTCTGTTCTCGTAGGGCTCACTAAGAAAGATTATAGTCTTGAGGGATTAATCAAATTCAAGTGGAAAAATTTCCAGGATGGGCGACAAGATAGCTGTGTAGCAAATGCTTGGTTTGAGGTGCTATCTGCAGTTCACCTTATGGCTATGCTTACATTGTCAGAGGCTGACTCGTTATTGATCCCAAAGGACTTATCAGGATCTGGAATAAGGGTTGTATCTTCAGATAACAAGAGGGAAGCAGTGGATTTATTACTGAAGGCATCAGGATACCTGCAGTTCTGTGTTAGAGATGTTCTTACTCGGATGCCACCAGACAGCAAGAATATGTTACCCCATGACTTGCAGGATGGTGTATTGGAGGCTATATCCATTCAAGCACTAGGCCAGGGAACAGAAATTCAACTTGGCCTTGCTGTTGAATGTCAGAAGGCAACTTTGTCAGTGAAGAGGAGGTTGGCATGTGAACAATTGATTTACTTTAGTCAGGCTTACCAGTGCTTATCAGGATGTGGCTTCAACCAAGGGTATGGAAAGAAGCATCTCCGCTTCATCAAATGGAAATTCCTTGAAGCCAAGGCTGCAGCCTACTACTACCATGGCCTGATCCTTGACAAGGATAATGAACCAAGCAGTCACATCGGTGCTATGTCTTGTTTTCTTGCTGCAGAAGAACTTCTGGCTGAGAGCAGGAAGGCCTGCTTAAGCTTTTGTGTTGCAACTCCAGTGACCAGGGCTGCTCCACTTTGGGGTGCCATGAAACATTTACATCAGAAAATTCCTGAAGTTACATCAAGGAAGTCTCAGATGTATGGCTACCTATTGGAACAAGAGAAGGGTCTCCGAGCATTGCCTGAGCTGCCTGATTTTCAACTGTCATTGCGTCCAGATGACTATGAACTGCCTGAAATAGACGCAGCATGGGATAATAAAAACTGGGAAAATCTGGGACAGCCCTTGAAAGAGCATCTTCGAGAAAGCGAAGAAGAGGTTTCAGCTGAATAA 1251 0.4524 MGCTYSVHALGKKKKKTIIPEVVVFVPSTPIPVQSDLQRALRGLVPRDLADRLSSLRNQIVLVAEDTGGSAIAELRRALNEYLSVLVGLTKKDYSLEGLIKFKWKNFQDGRQDSCVANAWFEVLSAVHLMAMLTLSEADSLLIPKDLSGSGIRVVSSDNKREAVDLLLKASGYLQFCVRDVLTRMPPDSKNMLPHDLQDGVLEAISIQALGQGTEIQLGLAVECQKATLSVKRRLACEQLIYFSQAYQCLSGCGFNQGYGKKHLRFIKWKFLEAKAAAYYYHGLILDKDNEPSSHIGAMSCFLAAEELLAESRKACLSFCVATPVTRAAPLWGAMKHLHQKIPEVTSRKSQMYGYLLEQEKGLRALPELPDFQLSLRPDDYELPEIDAAWDNKNWENLGQPLKEHLRESEEEVSAE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2040 416 Coils Coil 72 92 - -
Dere01g2040 416 CDD BRO1_Alix_like 10 379 - -
Dere01g2040 416 Gene3D alix/aip1 like domains 38 399 IPR038499 -
Dere01g2040 416 PANTHER UNCHARACTERIZED 1 397 IPR038898 -
Dere01g2040 416 SMART BRO1_2 23 386 IPR004328 -
Dere01g2040 416 Pfam BRO1-like domain 51 312 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2040 Dere-ChrDere01 34401502 34404015 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2040 01 34401502 34404015 Dere01g2040 01 34401502 34404015 ECH