Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2018 ATGCCAGAGGAAGACTTAGTGGAGCTTAAGTTCCGTATCTATGATGGCTCAGATATTGGGCCCTTCCGCTACTCGCCAGCTTCTACTGTAGCCATGCTAAAGGAAAGAATTGTTGCAGACTGGCCAAAAGATAAGAAAATTATACCAAAGGCAGCAAATGACATAAAACTTATAAATGCTGGAAAAATTTTGGAAAACAACAAGACAGTTGGCCAATGTAGAGCACCTTTCGGTGAGCTTCCTAGAGGGGTTATCACCATGCATGTTGTCGTCCAGCCATCTTTGGCAAAAGCCAAAGCAGAGAAAAAGGTTGATGAGGCCCCAAGAAAACACATATGTTCATGTTCGATATTGTGA 357 0.4258 MPEEDLVELKFRIYDGSDIGPFRYSPASTVAMLKERIVADWPKDKKIIPKAANDIKLINAGKILENNKTVGQCRAPFGELPRGVITMHVVVQPSLAKAKAEKKVDEAPRKHICSCSIL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2018 118 ProSiteProfiles Ubiquitin domain profile. 7 73 IPR000626 GO:0005515
Dere01g2018 118 CDD Ubl_MUBs_plant 6 93 - -
Dere01g2018 118 Gene3D - 1 100 - -
Dere01g2018 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 117 IPR040015 -
Dere01g2018 118 SUPERFAMILY Ubiquitin-like 2 96 IPR029071 -
Dere01g2018 118 PIRSF MUB 1 118 IPR017000 -
Dere01g2018 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2018 Dere-ChrDere01 34238846 34242326 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2018 01 34238846 34242326 Dere01g2018 01 34238846 34242326 ECH