Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1973 ATGACCCGTAAAAAGACATTGCCCATCCGTCGCGCTGGCAGTAGCTTTCAGGTGAGTCAGATGAGGGTTGTGGAGGATAAGGGCAGTGGTTCCTCAGGTGATAAACCTCAGGATGCAGATTATAATGTGCCGTCTCTAAGCGACGAGCTAGAGACCCTGATCTTGGCTAGATTTCCAAGATCTGAGTATTGGAAACTTCGCTTTCTTAACAGAAGGTTTCGAACTCTAGTCAAAAGTGGTGAAATCTATAAAATCAGGAGGGAAATAGGGTTCAAAGAACCCGTTGTGTTCATGTTAGCAAGTGGGGAGAGCAATTGGTGGGCATTTGATGAGCATTTCAGGTCCTGCAGGACGCTCCCCATTATTCCATCAGACTATAATTTCACATTTGGAGATAAGGAGTCATTCTGTGCAGGTACCCATTTGTTTGTTTCAGGCAGGGAACTTGATGGAGCTGCTCTTTGGAAATACGAGTTAGCCACAAATCAATGGTTCAAGGGTCCTTCCATGATCAGCCCGAGGTGTCTTTTTGCATCAGCCACTTCTGGTGACTTTGCTTTTGTCGCAGGTGGTTTAGACACTAGTTTTGAAGTCTTGAATTCTGCTGAGAAATACGATTCAGAGATGAAGTCTTGGAAATCTCTCCCTAGGATGAATCAGAAGAGAAAGTCTTGCTCAGGTTGTTACATGGACAAAAAGTTCTATGTAATTGGGGGACATGACGAGCAGCAAAACGTCCTCACTAGTGGGGAATTCTTTGATGAAGAAACAAACACTTGGAACTTGATTCCTGACATGTTGAAAGACATTCCTGTTGCGGTTTTACGGGCCCCACCTCTTGTTGCTGTTGCCAACAACGAGCTTTACGCCCTTGATGCCTCTTCCAACGAGCTGAAGGTTTATCTGAAGGGAAGCAACTCATGGAAGAAGTTAGGAACAGTTCCTGTGATAGCTAATGCTCAAGGAGGTTGGGGTGTGGCATTCAAGTCTCTGGGCAATGAGCTGCTTGTAATTGGTGCAACTTCTAGGTCTTCTGCAGGTCGTGGCTTGACGATATACACTTGTTGCCCTGATCCATCTGTTGAGGAGTTGCAATGGAGGCGAATTGAATGTGGCAGCACCAAGCTCAGTCCCTTTATTCACAATTGTGCTGTGATGGCTCAAAAACACGATCTCACTGTAGATATTCGAAGGTCAGATACCCTGCCTGGTGCTCTATGCCTTGATTGTTTCAGATTTAGTCGTTCAGGGATTCTGGGCTGCGAATTCCAAGTTGATGATTGGAACCGTTCTTTCTTAATCTTTTCGGCATGCCCTTTGCTTGCTCGTTGA 1332 0.455 MTRKKTLPIRRAGSSFQVSQMRVVEDKGSGSSGDKPQDADYNVPSLSDELETLILARFPRSEYWKLRFLNRRFRTLVKSGEIYKIRREIGFKEPVVFMLASGESNWWAFDEHFRSCRTLPIIPSDYNFTFGDKESFCAGTHLFVSGRELDGAALWKYELATNQWFKGPSMISPRCLFASATSGDFAFVAGGLDTSFEVLNSAEKYDSEMKSWKSLPRMNQKRKSCSGCYMDKKFYVIGGHDEQQNVLTSGEFFDEETNTWNLIPDMLKDIPVAVLRAPPLVAVANNELYALDASSNELKVYLKGSNSWKKLGTVPVIANAQGGWGVAFKSLGNELLVIGATSRSSAGRGLTIYTCCPDPSVEELQWRRIECGSTKLSPFIHNCAVMAQKHDLTVDIRRSDTLPGALCLDCFRFSRSGILGCEFQVDDWNRSFLIFSACPLLAR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1973 443 Pfam Kelch motif 173 220 - -
Dere01g1973 443 Pfam Kelch motif 222 266 IPR006652 GO:0005515
Dere01g1973 443 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 39 387 - -
Dere01g1973 443 MobiDBLite consensus disorder prediction 21 41 - -
Dere01g1973 443 SUPERFAMILY Kelch motif 103 363 IPR015915 GO:0005515
Dere01g1973 443 Gene3D - 88 371 IPR015915 GO:0005515
Dere01g1973 443 FunFam F-box/kelch-repeat protein SKIP11 88 371 - -
Dere01g1973 443 SMART kelc_smart 233 286 IPR006652 GO:0005515
Dere01g1973 443 SMART kelc_smart 141 184 IPR006652 GO:0005515
Dere01g1973 443 SMART kelc_smart 187 232 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1973 Dere-ChrDere01 33894730 33897189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1973 46 263 Miscellaneous Gene Families AT4G33900 25.561 1.64e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1973 01 33894730 33897189 Dere01g1973 01 33894730 33897189 ECH