Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1967 ATGGGGCGGAAGAACACATTTTTCTTGGTATTGATCGCCACTTTGATCACAAAGCAAGCCTTGGCTGCTCAATATGTTGTTGGTGGAAGCCAAGGTTGGGATGAATCCACAGATTTTAACTCATGGACTTCAGGACAGACATTCAAGGTCGGCGATCAACTTGTTTTCAAGTACAGTTCTGGGTTGCATAGTGTGGTTGAAGTAGGCAGCGAGAGTGACTTCAAGAACTGTGACATTAGCAGTCCAGTGAACACCATGAGCAGTGGGAATGATGTCGTAAAACTGAACAAGGCAGGTACGAGGTACTTCACATGTGGTACTCCTGGCCATTGCGGGCAAGGCATGAAGGTGAAGATTACAACAGTGGCTGGGAATGGACCCTCTGCCCCTGCTTCAACGACGTCGTCGTCGTCGTCTCCTTCTTCATCATCTTCCCCTGCTTCAACTTCTGCAGCTTCAGCCTCACATGGGCTTGCTGTCTCCTTCGTGCTAAGTTTTGCATTGTTAGCTGTCTCTCTGTTTTTTCCGTTTTGA 534 0.4794 MGRKNTFFLVLIATLITKQALAAQYVVGGSQGWDESTDFNSWTSGQTFKVGDQLVFKYSSGLHSVVEVGSESDFKNCDISSPVNTMSSGNDVVKLNKAGTRYFTCGTPGHCGQGMKVKITTVAGNGPSAPASTTSSSSSPSSSSSPASTSAASASHGLAVSFVLSFALLAVSLFFPF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1967 177 FunFam Blue copper 21 126 - -
Dere01g1967 177 SUPERFAMILY Cupredoxins 22 121 IPR008972 -
Dere01g1967 177 Gene3D - 21 126 IPR008972 -
Dere01g1967 177 MobiDBLite consensus disorder prediction 125 148 - -
Dere01g1967 177 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Dere01g1967 177 MobiDBLite consensus disorder prediction 122 148 - -
Dere01g1967 177 CDD Phytocyanin 23 120 - -
Dere01g1967 177 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Dere01g1967 177 PANTHER BLUE COPPER PROTEIN 21 140 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1967 Dere-ChrDere01 33848538 33849164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1967 8 122 Miscellaneous Gene Families AT3G27200 64.348 1.93e-52 163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1967 01 33848538 33849164 Dere01g1967 01 33848538 33849164 ECH