Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1962 ATGCTTGTTAATTCATTCTTATCGGTGTCATTAGCCATTTATGAAGATTTGCAATTGCACCATTTTGTCCCCAATCTGACCATCGGTGCTCCGGTCATTGAAAGCTTGCGAAAGCACACAAAGGCTTATCTGGACTGTCACCTGATGGTCACAAATCCTCTTGATTATGTTGAACCTTTGACAAAGGCTGGTGCTTCTGGTTTTACATTTCATATAGAGACATCTAAAGATAATTGGCCTGAACTTGTCCAAAGAATAAAGTCAGGGGGCATGACGCCTGGTGTTGCATTAAAGCCTGGGACGCCAATTGAAGAGATTTATCCTCTGGTTGAAGCTGAAAATCCTGTGGAATTGGTCCTTGTGATGACTGTGGAACCTGGATTTGGAGGACAGAAATTTATGCCAGAGATGATGGATAAGGTACGGCTGCTAAGGCAGAAGTATCCATCACTTAATATAGAGGTTGATGGTGGATTAGGGCCTTCAACCATTGATGCGGCTGCATCTGCGGGAGCAAACTGCATTGTTGCAGGAAGTTCGGTATTTGGAGCCCCTGAGCCAGCTCAAGTAATATCCTTGTTGAGAAAGAGTGTTGAGAAAGCCCAGCAAACAAGTTGA 618 0.4401 MLVNSFLSVSLAIYEDLQLHHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLTKAGASGFTFHIETSKDNWPELVQRIKSGGMTPGVALKPGTPIEEIYPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRLLRQKYPSLNIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPAQVISLLRKSVEKAQQTS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1962 205 FunFam Ribulose-phosphate 3-epimerase 9 205 - -
Dere01g1962 205 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 119 141 IPR000056 GO:0005975|GO:0016857
Dere01g1962 205 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 16 203 IPR000056 GO:0005975|GO:0016857
Dere01g1962 205 CDD RPE 21 195 IPR000056 GO:0005975|GO:0016857
Dere01g1962 205 Pfam Ribulose-phosphate 3 epimerase family 14 182 IPR000056 GO:0005975|GO:0016857
Dere01g1962 205 Gene3D Aldolase class I 13 205 IPR013785 -
Dere01g1962 205 SUPERFAMILY Ribulose-phoshate binding barrel 20 200 IPR011060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1962 Dere-ChrDere01 33816464 33818281 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1962 01 33816464 33818281 Dere01g1962 01 33816464 33818281 ECH