Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1450 ATGAAGCACTACTTTTCTTTGATTGATGAGTTAAAGAACGAAGATATCCAGCTCAGATTGAACTCGATCCACAGACTTTCCACAATTGCACGTGTACTTGGGGAGGAAAGGACCAGGAAGGAATTGATTCCTTTTCTCAGTGAGAACAATGACGACGATGAAGAGGTGCTTCTTGCAATGGCGGAGGAGTTGGGGGTTTTTGTTCCTTATGTTGGAGGTGTAGAGCATGCCAATGTGCTACTAGCTCCATTAGAAGCCCTTTGCTCGGTTGAGGAAACTTGTGTGAGGGACAAATCACTGGAGTCACTATGTAGAATTAGAGCTCAAATGAGAGACAATGACTTGGTCGATTACTTTATTCCTCTGATAAAGAGACTGGCTGCTGGTGAGTGGTTCACAGCACAAGTTTCGTCATGCGGCTTGTTCCATATAGTTTATCCTAGTGCACCAGAGACATCAAAAACGGAGCTGAGAACTATATATGGTCAGCTGTGTCAAGATGAGATGCCCATAGTTAGGAGATCTGCTACGACAAACCTGGGAAAATTTGCTGCCACTGTTGAAGCAACTCACTTGAAAACCAACATCATGTCCATGTTTGATGTTCTCACGCGAGATGAACAAGATTCTGTTCGGCTACTTGCTGTTGAGGGCTGTGCAACTCTTGGGAAATTGTTGGACCCTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTCTCACAGTTCACAACTGATCAAGTTTGCCTACCATGGGATTTATCAACAGATTCATCTCAACATGTTCGCTCTGCATTAGCTTCAGTTGTAATAGGAATGGCACCAAATTTAGGGAAGGATGCTTATATCCCTTTTGCATTTTCTCTATTTCTGCGTTACTTGCTGGATGCAACAATTGAGCAGCTTCTGCCTATTTTCCTTTCACTTTTGAAAGATGAGTTTCTTGATGTCAGGCTGAACATTATCAGCAAGCTTGATCAAGTGATTGGCATTGATCTATTATCTCAGTCTCTATTACCAGTTATTGTTGAGCTTGTTGAGGATCGCCACTGGAGAGTTCGTCTTGCAATCATAGAATATATACCCTTATTGGCAAGTCAGTTGGGCGTTGGATTTTTTGATGACAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGATTTGTGAAACAAGTAAATTTTATGTATACTCAATTCGTGATGCTGCTGCTAATAATGTGAAACGGTTAGCAGAAGAATTCGGACCAGATTGGGCAATGCAACATATTATTCCTCAGGTGGTTGAGAAGACCATCCGTCCCTGTTTGGTAGATCTTAGTGAGGATCCAGATGTTGATGTTAGGTTTTTTGCCTCCCAAGCGCTACAATCTAGCAAACAAGTCACGAAGCACAGCTAG 1407 0.4236 MKHYFSLIDELKNEDIQLRLNSIHRLSTIARVLGEERTRKELIPFLSENNDDDEEVLLAMAEELGVFVPYVGGVEHANVLLAPLEALCSVEETCVRDKSLESLCRIRAQMRDNDLVDYFIPLIKRLAAGEWFTAQVSSCGLFHIVYPSAPETSKTELRTIYGQLCQDEMPIVRRSATTNLGKFAATVEATHLKTNIMSMFDVLTRDEQDSVRLLAVEGCATLGKLLDPQDCVAHILPVIVNFSQFTTDQVCLPWDLSTDSSQHVRSALASVVIGMAPNLGKDAYIPFAFSLFLRYLLDATIEQLLPIFLSLLKDEFLDVRLNIISKLDQVIGIDLLSQSLLPVIVELVEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKICETSKFYVYSIRDAAANNVKRLAEEFGPDWAMQHIIPQVVEKTIRPCLVDLSEDPDVDVRFFASQALQSSKQVTKHS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1450 468 ProSiteProfiles HEAT repeat profile. 435 468 IPR021133 -
Dere01g1450 468 ProSiteProfiles HEAT repeat profile. 340 378 IPR021133 -
Dere01g1450 468 ProSiteProfiles HEAT repeat profile. 304 330 IPR021133 -
Dere01g1450 468 Gene3D - 252 461 IPR011989 -
Dere01g1450 468 Gene3D - 4 251 IPR011989 -
Dere01g1450 468 SUPERFAMILY ARM repeat 6 459 IPR016024 -
Dere01g1450 468 Pfam HEAT repeats 306 389 - -
Dere01g1450 468 ProSiteProfiles HEAT repeat profile. 196 234 IPR021133 -
Dere01g1450 468 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 6 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1450 Dere-ChrDere01 27684359 27690373 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1450 01 27684359 27690373 Dere01g1450 01 27684359 27690373 ECH