Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1115 ATGTGTCAGCTAAGATCTCTTCTTCCCTGCAAATGCAATTCAAATCCCGATTACCTCAAAGATCCAGCAGAAGAGCTGGCCAACCCATTGATCCTCAAAGAGGTGAATCCAGTAGTACAAATCCAGAAAACCCATCTCTCTGATGCCTTTGAAGAGCTTGTTTCTATAGCCAAAATAGCTCTTCCTATGATACTCACTGGTCTTCTGCTATACTGTCGTTCTATGATCTCCATGCTCTTCCTCGGTCGCCTCGGCGAGCTCGCCTTAGCCGGTGGTTCGCTCGCGGTTGGGTTCGCTAACATCACTGGTTACTCCATCCTCTCTGGTCTCGCCGCTGGAATGGAACCCATTTGTGGACAAGCCTTCGGTGCTAAGAGATTCACTCTCCTGGGTCTCTGCTTACAGAGAACGATTCTTCTCCTGCTTTTCACCTCCATTCCTATATCTCTGCTTTGGCTATACATGAAGACAATCCTGCTCTTGTGCGGCCAGGATGAAGCTATAGCCACACAAGCCCAATCCTATCTTCTCTATTCCATTCCTGACCTACTGGCTCAATCTCTTTTACACCCATTACGGATTTACCTTCGCACTCAATCCATTACTCTGCCCCTCACTGTCTGTGCCATCTTCTCTGTTTTACTTCACATACCCATCAATTACTTCCTCGTCTGGCACCTTAATTTAGGAATCAAAGGCGTGGCTCTCGGTGGGGTTTGGACTAACTTCAACCTTGTCGCATCTTTAATCTTGTACATCATTTTTTCCGGCACTCACAAGAAAACATGGGGAGGTTTTTCTATCGAGTGCTTCACGCAATGGAGGTCCCTTCTGAATTTGGCGATTCCAAGCTGCATTTCCGTCTGCCTCGAATGGTGGTGGTACGAGATCATGATTTTGCTCTGTGGGTTGCTTTTGAATCCTAAGGCCACTGTGGCTTCCATGGGCATTTTAATCCAAACCACTTCTTTACTCTACATCTTCCCATCATCCATAAGCTTCAGTGTGTCCACCAGAGTTGGGAACAAACTAGGCGCCCAGAAGCCCTCAAAGGCAAAGCTCTCTGCCATTGTGGGTCTCTCTTGCAGCTTCATCTTAGGCCTCTCGGCTCTTGCTTTTACTGTAATGGTTAGGAACGTGTGGGCCTGCACGTTCACTGTGGACAAAGAGATTATAAGCCTAACATCCATGGTTTTACCCATAATAGGGCTCTGTGAGCTGGGAAATTGCCCACAAACCACAGGGTGTGGAGTGCTAAGAGGAACAGCGAGGCCAGAAGTTGGTGCTCACATAAACTTGGGATGTTTCTACCTTGTGGGAATGCCTGTGGCCATTTGGCTAGCTTTCTTCGCTGGGTTTGATTTTGAAGGTCTATGGTTGGGGCTTCTGGCTGCACAGTTCTCCTGTGCAGTGACTATGTTGGTGGTTCTGAGTCAAACGGATTGGGAAAAAGAGGCTCGAAGAGCCAATAAACTCACAGAAACAGGGGAAGGAGGTAGTGGGGTTGATGCAGAGAAGACGACCCAAGATGAAGATAGCGAACAAGATTCTTTATCATTAGTTGATTCTTCAGATGAAGAAGATAAGCAATCGTGGGTTTAA 1602 0.4719 MCQLRSLLPCKCNSNPDYLKDPAEELANPLILKEVNPVVQIQKTHLSDAFEELVSIAKIALPMILTGLLLYCRSMISMLFLGRLGELALAGGSLAVGFANITGYSILSGLAAGMEPICGQAFGAKRFTLLGLCLQRTILLLLFTSIPISLLWLYMKTILLLCGQDEAIATQAQSYLLYSIPDLLAQSLLHPLRIYLRTQSITLPLTVCAIFSVLLHIPINYFLVWHLNLGIKGVALGGVWTNFNLVASLILYIIFSGTHKKTWGGFSIECFTQWRSLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPKATVASMGILIQTTSLLYIFPSSISFSVSTRVGNKLGAQKPSKAKLSAIVGLSCSFILGLSALAFTVMVRNVWACTFTVDKEIISLTSMVLPIIGLCELGNCPQTTGCGVLRGTARPEVGAHINLGCFYLVGMPVAIWLAFFAGFDFEGLWLGLLAAQFSCAVTMLVVLSQTDWEKEARRANKLTETGEGGSGVDAEKTTQDEDSEQDSLSLVDSSDEEDKQSWV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1115 533 CDD MATE_eukaryotic 52 488 IPR045069 GO:0042910|GO:1990961
Dere01g1115 533 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dere01g1115 533 Pfam MatE 283 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dere01g1115 533 MobiDBLite consensus disorder prediction 488 533 - -
Dere01g1115 533 PANTHER MULTIDRUG RESISTANCE PROTEIN 49 482 - -
Dere01g1115 533 NCBIfam MATE family efflux transporter 62 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1115 Dere-ChrDere01 22526290 22527891 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1115 01 22526290 22527891 Dere01g1115 01 22526290 22527891 ECH