Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1087 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAACTGCAGTTTCAGGCAACTCAGGTGCCAAAGATGAAGAAATCTGCGCTGACGATATCTCTGGTGCCAGATGATGTCGGGAAGCCAACAGTGAAACTAGAGAAAACTGCGGTCCAGGATGGAACCTGCATATGGGAGAACCCAATTTTTGAATCAGTTAAACTCGTTAGGAATTCAAAAACAGGACACTTACATGAGAAAATTTACCATTTCATTGTTGCAACTGGATCTTCAAAATCTGGTTTTCTTGGGGAAGCCTCAATCGATTTTGCTGATTTTGCAGCAGAAACTGAGCCACTGACTGTTTCGCTCCCATTAAAGTTTGCTAATTCAGGTGCAATTTTACATGTGACAATTCAGAATGTGGAAGGATATACTGATCAAAGAAACGTGGAAGATGGAGCTCTGGAGCTTTCCAATGATGGAAGCTTGAATCATCAACTGAGTTATTGCAGTACAGAAGACAATTCTTATAATGTTGATGAAGATGGGCACCTGGCCAAGACCAGATCTGGTTATACTGAACAAAATGCCCCCTTTAGATCATCTAATGGCGTCAGTCCTGAGGTGGCTTTGTGGGAGGAACTCAACTCTGAACACAACACCCATGATGGGAAGACAACTACCCAGGACTCGTCGTTCAGGCAGAATAATGGAACTGTTGAGGCCATTGCTAATGAAACCCATGTGCATAAGAGGTCAAACACAGACTGGTCAGTGGGTTCTGCATCAGATGGAAGTTTAGGTGACTGGACAAACAGCTTTGAAGATAATCTTCCAAGGGATAGATTACAAGAGCATAAAGATAATGCCACTGAAAAGCTCAAAAGTGAAATTGCATCTCTAATGAGGCAGGTAGAAGTGTCAGAACTTGAATTACAATCACTTCGTAGGCAGGTAGCTAAAGAAAGCAGTGGAGGACAGAATATGTCGAGACAAATAATCAGCCTGAGAGAGGAGAGAGATATGCTCAAAACTAAATGCGAGCAACTTGAGTCCCAGCAAAACTGCAATCATGAGACCAAAACTTCAAAAGCCTTACAGTCTGAGATCAAAGATGCTAGGCTTCAGTTAAAAGCAATAAAGGAAGAGCTTGTTTATGAAAAGGAGTTAAGTAACAATTTTCAATTGCAGCTGCAGAAGACACAAAACTCAAACTCTGAGCTACTATTGGCAGTCAGAGACCTTGAAGCAATGCTGGAACAAAAGAATAACGAAATATTGGATCTGTCTAGGAATATAAATTCCCAAAACATTACTAAAAAGCATGATTATACCACAGAAGTAGATCTCCTGAGACAAAAGATTTCAGAACTTAATGGCGGAATAGACACATATATTAAGCACAATGAAGAGCTAAATGAGCAGATAAGGGAGCTCAGCTCAGAGTATGAGCTTCTGAAGAAGGAAAACCTGGATATTTCTTTGAGATTGAAGCAAGGAGAAGCACAACAAATTATGTTACAAAATGAACACTCAGCATCTTTGGCTACTGTCCAACAACTTGAATCACAAGTAGAGATATTAGAGGAAAAGATAAAGAAGCAGGCGGTTGAGTTTTCAGAATCATTGGTCTGTATCAATGAACTTGAAAATCAAGTCAAGACTTTGGAGAAAGAACTGAAAGTACAGGCAGAGAAATTTGAAGAAGATCTGCATGCTATGAAATGTGCAAAAATTGAGCAGGAAGAACGGGCAATTCAAGCTGAGGAGACCTTGAAAAAGACAAGACAAAATAATGCTATCGCATCTGACTGCTTGCAGGAGGAATATAGAATGCTTTCAGTTGAAATGGCATCCAAAGTTGAGGAAAATGAAAGGATGATGATGAAAGCAGCTGCAGAAGCTGATGAATTGGGGCAGCAGAACAAACTAATGGAAGAAATGCTCCAGAAGTGCAACCAAGAGCTCAGGCTTATTACAGATCAGAATGAATTGAAACATCAAGAGCTTTTAAACCAGATAGATATAAAAGGAGAAACAATAGAACAAATGTCAAAAGAACTGGATAGTAAGTCTAAACTCCTTGAAGAATTACAAAGGCACAGGAATGAGAAGGATAAAGCTTTCTTTATTCAAATTCAAATGCTTAGTTCTGAAATTAAAAAGCTGATGGCAGAGGAGGATAAATTGACCAAGCCAACAGAAAACATGAATGCGATCACAAAGCAAGATGAGCACAAAGAAAGAAATGGTTTGCAGAAGGAGATCACACTGGATGCCCTACTGTCAGAAGTACACATCTTCAAGATGCAACACAACAAATTAAAACATAGCATGCACAATGAACAAGTAGAGAAAGAGAATATGAAGAATAAGATATCTCAACTACAAGGTGAACTGAAGAAGAAAGAAGCAGAACTAAGCATTATGGAAAAGAAGCTCAAGAATAACAGAGGACGAGTTCCAGCTACACATGTGACTTTGACTTCAAGAGATGAGTGTGCTGCAGTTCATTCTTCTGCTAAGGCGCATGTCAAGAAGTCAAAATCAGAAACACCTAAGGGCACATATGCTGCAAGCACCATTGTTGGCAAGTCTGAAGAAAAAGGATCAGTAGGCAAGTCAGTACACACGGAAGCTTGTCTAGCACCACACAGAAGTGAAGAAGAAACTTGCTTGGGAAATGAGGCTATTGTCTTCAACAATAATCATGTTGGTGAGTGCAATACAAATGAATTGATGACTGAAGTGGCAATGCTGAAGGACAGGAACACAAAAATGGAAAAAGAGCTGAAAGAGATGGAAGAGAGATACTCAGAGATTAGTCTCAAATTTGCGGAGGTAGAAGGTGAAAGACAACAGCTTGTTATGGCTCTACGTAATCTAAAAAATGGTAAGAAGAACTAG 2895 0.3969 MFKSWSKKNKIKAVFKLQFQATQVPKMKKSALTISLVPDDVGKPTVKLEKTAVQDGTCIWENPIFESVKLVRNSKTGHLHEKIYHFIVATGSSKSGFLGEASIDFADFAAETEPLTVSLPLKFANSGAILHVTIQNVEGYTDQRNVEDGALELSNDGSLNHQLSYCSTEDNSYNVDEDGHLAKTRSGYTEQNAPFRSSNGVSPEVALWEELNSEHNTHDGKTTTQDSSFRQNNGTVEAIANETHVHKRSNTDWSVGSASDGSLGDWTNSFEDNLPRDRLQEHKDNATEKLKSEIASLMRQVEVSELELQSLRRQVAKESSGGQNMSRQIISLREERDMLKTKCEQLESQQNCNHETKTSKALQSEIKDARLQLKAIKEELVYEKELSNNFQLQLQKTQNSNSELLLAVRDLEAMLEQKNNEILDLSRNINSQNITKKHDYTTEVDLLRQKISELNGGIDTYIKHNEELNEQIRELSSEYELLKKENLDISLRLKQGEAQQIMLQNEHSASLATVQQLESQVEILEEKIKKQAVEFSESLVCINELENQVKTLEKELKVQAEKFEEDLHAMKCAKIEQEERAIQAEETLKKTRQNNAIASDCLQEEYRMLSVEMASKVEENERMMMKAAAEADELGQQNKLMEEMLQKCNQELRLITDQNELKHQELLNQIDIKGETIEQMSKELDSKSKLLEELQRHRNEKDKAFFIQIQMLSSEIKKLMAEEDKLTKPTENMNAITKQDEHKERNGLQKEITLDALLSEVHIFKMQHNKLKHSMHNEQVEKENMKNKISQLQGELKKKEAELSIMEKKLKNNRGRVPATHVTLTSRDECAAVHSSAKAHVKKSKSETPKGTYAASTIVGKSEEKGSVGKSVHTEACLAPHRSEEETCLGNEAIVFNNNHVGECNTNELMTEVAMLKDRNTKMEKELKEMEERYSEISLKFAEVEGERQQLVMALRNLKNGKKN 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1087 964 Coils Coil 677 700 - -
Dere01g1087 964 Coils Coil 359 379 - -
Dere01g1087 964 Coils Coil 458 485 - -
Dere01g1087 964 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Dere01g1087 964 Coils Coil 542 595 - -
Dere01g1087 964 Coils Coil 276 314 - -
Dere01g1087 964 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Dere01g1087 964 Coils Coil 768 816 - -
Dere01g1087 964 Coils Coil 906 947 - -
Dere01g1087 964 Coils Coil 394 435 - -
Dere01g1087 964 Coils Coil 955 964 - -
Dere01g1087 964 Coils Coil 329 349 - -
Dere01g1087 964 Coils Coil 507 534 - -
Dere01g1087 964 Coils Coil 617 658 - -
Dere01g1087 964 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 902 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1087 Dere-ChrDere01 22049104 22053806 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1087 01 22049104 22053806 Dere01g1087 01 22049104 22053806 ECH