LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g0451	ATGGTACGTGGGTATCGGGGAGGAAGATTGAGCCTGGGCCGTGCCTATGATTTGGAAATTCCCTTTGTGTCGGACTTGGACTTGGCTGTGGAAGCAGAAAAAGGACAGGAGGGCGATGCACTGCCTGGAGAAGAAAAAGAAGATATAGTGCAGCAGAAAGAAAATTTTTGTTCAGTTGATAATGAGGAAGCTCAATCAGTGGATTCAGCTCTGGAGTCTGTCAACTGTTTATTCCCTGACGAGAACTTGGAATTATATGTGGAGAAGGAAGTTCCTTCAGCACCTTCAATGCCAGCAGACTTGATTTCTTTTTACCGTGATGAAGAGAATTGCCCATCCAAAGATGATCATCAGGAGGAGAAAACTATCAGATTCTTGAGTGGCCCTTCAGGAACTGAAACATCAAATTTGCCTTCAGACTCTCAGAATGAAAACAAAGTGTGTGAGACAGAATTGCAAGTTCTATCACCACCTCATGTAGTGTCAGTATTAGAATGTGATAACCTGAATTCTGCCTTTCAGGGACCAGAGAAAGGCCCCTCTGGAGCTGAAACATCATATCTGCCTACAAATTCTCAGAGTGAAAACAAAGTGCGTGAGACAGAATTGCAAGTTCTATCACCACCTCATGTAGAATCAGTCTATGAATGTGACAACGTGAATACTGCCTTTCAGGGACCAGAGAAAATGCCCAATTTTTCTGTAAACACGGAATCTTTATTCCATGTTGAAGAAGAATTTGAGGCTTTTCCTGGAGCAGAGATGCCCAGAGAAACCAACATTTTAAGCACGTTGAGAGAATATTTGAGGGACAACATTTGTTTGCCAGTTGTTGAAGCTGTCCAAGGGACCAAAATGCAGCAATTTCAGGATGATCAGAAAAATGTTCCATCCGATGTATCTACTTCAGAATTACCACCTCTTGAGCAGAAGGCTACCTTCGAAAAGCATTGGTCCAACAAGCCTACACATCTGGATCCCGCGTCTTTTGATAAACCAGGTGCAGCTATAGCGGCTGAAATGCCTAATGAAACTGGATGTGGATGCACACTGAGAGAGAATGATAGAGGGAGACATATTTTAACAACTGGAGCGGAAAATCTCATAACCGAGAAAACATTATTGCCAGTTGAAGAAGCTAATCTGGGTACCAAATTTCAACATGTCAAAATAATAGAAGAAGTTGCTTTGGATTCACTATCATGGGGTGAAAAACAAATCAATTGTTGTCCGGAGCAAAAGTTGCATTCCCAGCCACACTTGAATTCATGCACTTGTCAGGAGCAAGGGCACTCAATGGATGCAATAGTTCAAGATGTTGGAATCAAGTGCACAGATAACGTCTCCCTCATTTCTCTTCCAGCCGAATCCTTGAATACACCATTGCCTGAAAACAAGAGAAAGAACCAGACCCAGCGATCTCTCATTGCTGTGGCAGGATGCTCCAAGAAGAAAATTCCTGAAATACATCTAGAATCAGTAGAAAAAAATCTGAAGTGTAGTAATATTTGGTCAAGAAGAGGTAAAGCCGCTAGTGCCACTCAGATTCGAACTAGCAAGACTAGAGTCTTAAGCACAGCTAATGTTGACACTGAAGTTGATATGAGCAATCAGAAGGATACCAGGGAGAACACAAAAGCAAAGGATCTTTTATCAGTTTTAGATAAGGAAGAAGAAGAAGTCTTTACTCCAGATAAGGAAAATTTCAGCCCAAATACCCTTCAATTGCGGTTTCTGAAAAAGAATGGCGAACTGGAAGAAATTAAACTTTACAAGTCACTACAAAGGTCACACAATTATAAGGATTATTTTAGCTCCAACGTCTATCTAAATGAGATCCCGATTTCAAAAGAAGAGAACGAAATTCTAGAAGTTGCTCAAGAACAGAAGTCGGAAAGAAGGCCCTTTGGCTGTCATATCAAGTTGGAGCAAGATATTATTATAAATATGAGCAACCAGAAGGATATCAAAAATCAATCAAGTCCAAAGAATCTTATGTCTCATTTAGATGAGGAAGAAGAATTCCACACTCCAGATAAGGAAAACTTCAGCCCAAATACCCTTCAATTGCTGTTACTGGAAAAGAAGGATAAACTGTATGAACTTAAACATTCCAAGTCACGAAGATCGCACAGTTCAAATGCTAATTTTAGCTCCAACATCTATCCAGATGAAAGCAATATCACCATTTCAGGAAAGGAGAACCAAACTTCAAAAGTTGCCAAAGAACAGAAGTCAAAAAGAAGGCCGTTTGGCAGTCATATCAAGTTGGAGCAAGAGCAAGATGGTATGGTACTGGAGAACAGATTGGAAAGATTACCCTTCCAATCACTACTTACGAACTCTGGAGGCAAGAGCAGACCAGAGACATCTCGTTCTGTTTCTGCAGCAAAAGCCAAGTTGGAGCAAATGCAAGATATGGCACTGGAGAACAGATTGGAAAGGTTACCCTTCCAATCACTACTTACGAACTCTGGAGGCAAGAGCAGACCAGAGACATCTCGCTCTGTTTCTGCAGCAAAAGCCAAGTTGGAGCAAGAGCAAGATATGGCACTGGAGAACAGATTGGAAAGGTTACCCTTTCAATCACTGCTTACGATCTCTGGAGGCAAAAGCAGACCAGAGACATCTATTTCTGTTTCTGCAGCAAAATACAACAGTGCCCGTACATGTGCACAAATTTTAGACGAATGCACTAACTCGTCTCACATTAGTGAGAGGAACTGGAACATGGTTGTGGACACTGCTTCTCTACTGAACAAGGAGTCAAGGAAAGCGCTGCTGCTTTTACAAGTTATAAAGGAACTGGACAGCATGAAGCGACAATTTAGTTTCTTTAGAAGAACATCAGAGGCTTCTTCGGCATTGGAGTGGATTGAAGAATGTATGGTTAAGACAAAGTGGTGGATTCATGTTCAAGGCTCAATGGAGGAGGGAAGGTTGATCGCTCCCACCCCACCGGCTACTCCTCAGGCTCAATTTAGTGAAGAGGGTTGGCCATATACCCTTTCATCCTACAGGAGCTCAATGGAAATTGTTTCACCAACAGCTGAGGATCATATTCTTGACTGTGCTCTTCTGTATAGGAGAAAGCAGAATGATGGACAGCTTGTCCTTCTTAGCGATGATGTCACCTTGAAAATCAAATCCATGGCGGAGGGGTTGCTATGTGAAACAGCTCAGGAATTTCGTGAGAGTCTAGTAAATCCATTCTCTGAAAGGTTCTTGTGGGCCAGTAGCTCTCCTCGAGGATTGACTTGGTCATGCCAAGATGATGTCGTTTTGAGGGAGAAATACTGTCGTCACCCTTTGAGGAAATCATCAAAGGGAGAAGGTGCTAGGGGTCTGAAGCTCATTCTGCTTCACAATTCTCGTTATGGACAATTCAGTTCAGCCCGCTAA	3402	0.4224	MVRGYRGGRLSLGRAYDLEIPFVSDLDLAVEAEKGQEGDALPGEEKEDIVQQKENFCSVDNEEAQSVDSALESVNCLFPDENLELYVEKEVPSAPSMPADLISFYRDEENCPSKDDHQEEKTIRFLSGPSGTETSNLPSDSQNENKVCETELQVLSPPHVVSVLECDNLNSAFQGPEKGPSGAETSYLPTNSQSENKVRETELQVLSPPHVESVYECDNVNTAFQGPEKMPNFSVNTESLFHVEEEFEAFPGAEMPRETNILSTLREYLRDNICLPVVEAVQGTKMQQFQDDQKNVPSDVSTSELPPLEQKATFEKHWSNKPTHLDPASFDKPGAAIAAEMPNETGCGCTLRENDRGRHILTTGAENLITEKTLLPVEEANLGTKFQHVKIIEEVALDSLSWGEKQINCCPEQKLHSQPHLNSCTCQEQGHSMDAIVQDVGIKCTDNVSLISLPAESLNTPLPENKRKNQTQRSLIAVAGCSKKKIPEIHLESVEKNLKCSNIWSRRGKAASATQIRTSKTRVLSTANVDTEVDMSNQKDTRENTKAKDLLSVLDKEEEEVFTPDKENFSPNTLQLRFLKKNGELEEIKLYKSLQRSHNYKDYFSSNVYLNEIPISKEENEILEVAQEQKSERRPFGCHIKLEQDIIINMSNQKDIKNQSSPKNLMSHLDEEEEFHTPDKENFSPNTLQLLLLEKKDKLYELKHSKSRRSHSSNANFSSNIYPDESNITISGKENQTSKVAKEQKSKRRPFGSHIKLEQEQDGMVLENRLERLPFQSLLTNSGGKSRPETSRSVSAAKAKLEQMQDMALENRLERLPFQSLLTNSGGKSRPETSRSVSAAKAKLEQEQDMALENRLERLPFQSLLTISGGKSRPETSISVSAAKYNSARTCAQILDECTNSSHISERNWNMVVDTASLLNKESRKALLLLQVIKELDSMKRQFSFFRRTSEASSALEWIEECMVKTKWWIHVQGSMEEGRLIAPTPPATPQAQFSEEGWPYTLSSYRSSMEIVSPTAEDHILDCALLYRRKQNDGQLVLLSDDVTLKIKSMAEGLLCETAQEFRESLVNPFSERFLWASSSPRGLTWSCQDDVVLREKYCRHPLRKSSKGEGARGLKLILLHNSRYGQFSSAR	1133

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	172	197	-	-
	Dere01g0451	1133	Gene3D	-	903	1067	-	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	125	146	-	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	704	763	-	-
	Dere01g0451	1133	CDD	PIN_Smg5-6-like	912	1066	-	-
	Dere01g0451	1133	PANTHER	TRANSMEMBRANE PROTEIN 18	852	1123	-	-
	Dere01g0451	1133	Pfam	PIN domain	912	1060	IPR002716	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	820	842	-	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	711	737	-	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	777	797	-	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	820	841	-	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	124	146	-	-
	Dere01g0451	1133	MobiDBLite	consensus disorder prediction	738	763	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g0451	Dere-ChrDere01	10065082	10072200	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere01g0451	01	10065082	10072200	Dere01g0451	01	10065082	10072200	ECH