Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0422 ATGAAGTATGTGCCAGGATTTGCTGTTATTTTGATCCTCCTTGTGCTCTTAAATTCCGTACCGTTTTCTTCAGCCCAGCCTTTCTCGGTGGATGGGACGGTGTTGCAATTGGATGAATCCAACTTCGATTCTGCTATATCGACCTTCGATCACATCTTGGTCGACTTCTACGCTCCCTGGTGTGGTCACTGCCAGCGTCTGTCTCCCGAGTTAGATGCAGCTGCACCTGTACTTGTGGCCTTGAAGGAACCCATAGTCATAGCAAAAGTAGATGCAGACAAGTTTACCCGTCTTGCCAAAAAATATGATGTTGATGCATATCCTACCCTTATGCTGTTTATACATGGTATACCCACAGAATATCGTGGACCAAGGAAAGCAGATTTACTAGTTCGTTATCTAAGAAAGTTTGCTGCTCCAGATGTTTCCATTCTTGACTCAGATTCTGCTATCACAAACTTCATTGAAGCAGTCGGCACTTTATTCCCCATATTCATAGGTTTTGGGTTGAGCAATTCTATGATAGAAAAGTTGGCCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATATCATGGTATCATATGATTTTGATAAGGTTCCTGCTTTGGTTTCCCTTAATTTGGATTACAATCAGCGGAGCACTTTCTATGGTCCCTTTGAAGAGGAGTTTGTGGAAGATTTTGTGAAACAAAACCTGATTCCTTTAGCTGCACCTGTATCCTATGACACACTGAAGTTGATGAAAAGTGATGGGAGGAAAATTATTCTGACAATTTTTGAGAATGAAGATGAAGAAAGATCAAAGGAATTTATTGAGACACTGAAGGCTGCTGCATCTGCAAATCGTGATTTAATATTTGGTTATGTTGGGGTTAAACGGTTGGAGGAGTTTGCTGAAAAATTTGAGCTCAGTACACTACCAAAAATGGTTATCTGGGATGGAAGTGATGAGTACTTATCTGTTATTGGTTCAGAAAGTATTGATGGGGTGGATCAGGCAACTCAGATTAGTAAATTACTAGAAGGATACAGGGAAGGTAGAACCATACGGAAACAACTTAGTGGCCCATCACTGTTGCGAGTGATGAAAAAATCTTTCGACATCAGAATCGTCTATGTCTTTGTCATTGTGATTGCAATTTTGATGCTTCTTCAGATCTTTTATAAAGGAGATGATGAATACCAGAGGGTACCATATCAAGGCCAGGTTGATCATGCTAGCAGCTCTGCCTCAGAGGCTGAAAGCAAAGAGTACAAACCTGGAGACAAGGAAGAGTAA 1302 0.4071 MKYVPGFAVILILLVLLNSVPFSSAQPFSVDGTVLQLDESNFDSAISTFDHILVDFYAPWCGHCQRLSPELDAAAPVLVALKEPIVIAKVDADKFTRLAKKYDVDAYPTLMLFIHGIPTEYRGPRKADLLVRYLRKFAAPDVSILDSDSAITNFIEAVGTLFPIFIGFGLSNSMIEKLAIKYKKNAWFSVAKDFSEDIMVSYDFDKVPALVSLNLDYNQRSTFYGPFEEEFVEDFVKQNLIPLAAPVSYDTLKLMKSDGRKIILTIFENEDEERSKEFIETLKAAASANRDLIFGYVGVKRLEEFAEKFELSTLPKMVIWDGSDEYLSVIGSESIDGVDQATQISKLLEGYREGRTIRKQLSGPSLLRVMKKSFDIRIVYVFVIVIAILMLLQIFYKGDDEYQRVPYQGQVDHASSSASEAESKEYKPGDKEE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0422 433 PRINTS Thioredoxin family signature 103 114 - -
Dere01g0422 433 PRINTS Thioredoxin family signature 52 60 - -
Dere01g0422 433 PRINTS Thioredoxin family signature 60 69 - -
Dere01g0422 433 FunFam Protein disulfide-isomerase 5-2 22 138 - -
Dere01g0422 433 Pfam Thioredoxin 34 135 IPR013766 -
Dere01g0422 433 Gene3D Glutaredoxin 24 147 - -
Dere01g0422 433 MobiDBLite consensus disorder prediction 418 433 - -
Dere01g0422 433 MobiDBLite consensus disorder prediction 412 433 - -
Dere01g0422 433 SUPERFAMILY Thioredoxin-like 26 137 IPR036249 -
Dere01g0422 433 PANTHER PROTEIN DISULFIDE ISOMERASE 9 358 - -
Dere01g0422 433 Gene3D Glutaredoxin 230 364 - -
Dere01g0422 433 ProSiteProfiles Thioredoxin domain profile. 14 139 IPR013766 -
Dere01g0422 433 CDD PDI_a_family 35 134 - -
Dere01g0422 433 Pfam Thioredoxin-like domain 192 327 - -
Dere01g0422 433 ProSitePatterns Thioredoxin family active site. 53 71 IPR017937 -
Dere01g0422 433 SUPERFAMILY Thioredoxin-like 250 327 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0422 Dere-ChrDere01 9301537 9307122 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0422 01 9301537 9307122 Dere01g0422 01 9301537 9307122 ECH