Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0315 ATGTTCAATAAGATCATAAAGCGGGGCCACAAGAAATCGTCGAAATCGGAATTCAAGGGAAATTCTCCTGATGGTTATCGATCAGTGGAAGTCTCTGTGAACCATGCGTCTCGGGCCACCACCGTTACGGCTACCCCCAATTCGGGCCCAGAAAAGTTGGCTTCGACGGTGGCGCCGCCCATTTCCACCGCAGTGGAGTTACTACCTCCAGTGCGAGAAGTTGCCGTTTCAGAACGCCCAAGTATAGTACTTCGAAAAATTCAACTTTGTTGCTTTGTGTATGACAATTCAGACAGTACGAGGTCGGTTCGTGAAAAGGAAATCAAACGACAAACACTACATGAGCTGGTGGAGATTATACATTCTGGGTCATTCAAATTCAACGAACTTGCGTATGAAATTCTATTGAGGTACATAGTGTCACCTGAGACTGATACAAAGATTGCCAAGCGCTTTATTGATCATAAATTTGTTTTAAAATTGCTTGATTTGTTCGATTCGGAGGACCCACGAGAGCGTGAGTATTTGAAAACCATTCTTCACCGGATATATGGGAAGTTCATGGTGCACCGGCCTTTTATAAGGAAGGTGATCAATAATATATTTTATCGGTTTATATTTGAAACAGGGAGGTATAATGGTATTGCTGAGCTGTTGGAGTTTCTGGGTAGTATCATAAATGGGTTTTCATTGCCAATGAAAGAAGAGAATAAATTGTTTCTATTCGGGGCACTTATACCACTTCACAAACCAAAATGTTATGCCATATACCATCAACAACTGTCTTATTGCATCACTCAGTTTGTTGAGAAAGACTACAGATTGGTAGATCCCGTGATCAGGGGGTTATTGAAGTATTGGCCAGCCACAAATTGCCAGAAGGAGGTCCTTTTCCTCGTAGAATTAGAAGGGATTCTGGAGGCAACTCAATCTACAGAATTTCAACGGTGCATGGTCATTCTTTTCAGGAGAAACTCTACAAAGAATCGAGCCAAAGTCAGCATATGGAAGAAGGAAGCCATGGCTGCAGAACTGGAAGCTCGGCGTGAGTTGACATGGAAGAAACTGGAAGCAGGGGCTGCACAAGCTGTGAGTGATCATATGGTGTTGGTTAATTAG 1119 0.4298 MFNKIIKRGHKKSSKSEFKGNSPDGYRSVEVSVNHASRATTVTATPNSGPEKLASTVAPPISTAVELLPPVREVAVSERPSIVLRKIQLCCFVYDNSDSTRSVREKEIKRQTLHELVEIIHSGSFKFNELAYEILLRYIVSPETDTKIAKRFIDHKFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKVINNIFYRFIFETGRYNGIAELLEFLGSIINGFSLPMKEENKLFLFGALIPLHKPKCYAIYHQQLSYCITQFVEKDYRLVDPVIRGLLKYWPATNCQKEVLFLVELEGILEATQSTEFQRCMVILFRRNSTKNRAKVSIWKKEAMAAELEARRELTWKKLEAGAAQAVSDHMVLVN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0315 372 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 68 124 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere01g0315 372 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 128 324 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere01g0315 372 SUPERFAMILY ARM repeat 80 324 IPR016024 -
Dere01g0315 372 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 131 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere01g0315 372 MobiDBLite consensus disorder prediction 1 26 - -
Dere01g0315 372 Gene3D - 128 350 IPR011989 -
Dere01g0315 372 Gene3D - 71 127 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0315 Dere-ChrDere01 7659184 7662305 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0315 01 7659184 7662305 Dere01g0315 01 7659184 7662305 ECH