Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0142 ATGGCGAATGAAACACAAGTCCATTACGCTGAGGAGTTTATAGTGAACTCTCGTAGAATGGAGCTTTCGGCGTGCAGATGGGTTCCTGCGAAGGAAGAACCAAAAGCTTTGATCTTCATGTGCCATGGCTATGCCATGGAATGCACCACCACCATGGAAGGCACAGGAGTGAGGCTAGCAGAGGCAGGATTTGCAGTGTATGGGATCGATTACGAAGGGCATGGAAAATCAGATGGACTTCCTGGTTTCGTGAATAACTTCGATGATGTGATCGAAGATTGCTCTAACTATTTCTCATCAATTTGTGAGAAGAAAGAGAACAAGAACAAGATGAGATGCTTGCTAGGAGAATCCATGGGAGGAGCTGTGACTCTCCTATTGCACAGGAAAAAGCCAGAATACTGGGATGGTGCTATTTTGGTTGCCCCCATGTGCAAGCTTGCAGAAAAAATGAAACCAAAGCCAGTAATGATTAATATATTGACGGCACTAACCAAGGTCATTCCAACGTGGAGAATAATCCCAACCCAGGATCTCATTGATGTGTCCTTCAAGGTTCCTAAAATTAGAGAACAGATTAGAGAAAATCCATTATGCTACAAAGGGCGACCTCGATTGAAAACAGGATACGAACTTCTCAAAGTTAGTTCAAAAATCGAACAAAGGCTACACGAGGTTACACTACCCTTCTTGGTTCTACATGGAGAAGATGACGTAGTGACAGATAAATCAGTGAGCATTCAACTACACAAAGTGGCTTCAAGCACAGACAAGACAATCAAGTTGTACCCTGGAATGTGGCATAGTCTTTTGTTTGGAGAGCCATCAGAGAACTCGGACGTTGTATTCAAAGACATTATTGATTGGCTAGACCAGAAATGTCTCTATGGAAATACAAGAATAGAGAGGGAGCTTAAGAAACAAAACGAGTAA 933 0.4277 MANETQVHYAEEFIVNSRRMELSACRWVPAKEEPKALIFMCHGYAMECTTTMEGTGVRLAEAGFAVYGIDYEGHGKSDGLPGFVNNFDDVIEDCSNYFSSICEKKENKNKMRCLLGESMGGAVTLLLHRKKPEYWDGAILVAPMCKLAEKMKPKPVMINILTALTKVIPTWRIIPTQDLIDVSFKVPKIREQIRENPLCYKGRPRLKTGYELLKVSSKIEQRLHEVTLPFLVLHGEDDVVTDKSVSIQLHKVASSTDKTIKLYPGMWHSLLFGEPSENSDVVFKDIIDWLDQKCLYGNTRIERELKKQNE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0142 310 PRINTS Alpha/beta hydrolase fold signature 230 244 IPR000073 -
Dere01g0142 310 PRINTS Alpha/beta hydrolase fold signature 114 127 IPR000073 -
Dere01g0142 310 PRINTS Alpha/beta hydrolase fold signature 63 78 IPR000073 -
Dere01g0142 310 PANTHER PHOSPHOLIPASE-RELATED 12 292 - -
Dere01g0142 310 SUPERFAMILY alpha/beta-Hydrolases 15 293 IPR029058 -
Dere01g0142 310 Gene3D alpha/beta hydrolase 2 295 IPR029058 -
Dere01g0142 310 Pfam Serine aminopeptidase, S33 33 272 IPR022742 -
Dere01g0142 310 FunFam Alpha/beta-Hydrolases superfamily protein 4 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0142 Dere-ChrDere01 4892902 4896749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0142 1 310 Acyl Lipid Metabolism Gene Families AT2G39420 66.238 2.53e-161 450
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0142 01 4892902 4896749 Dere01g0142 01 4892902 4896749 ECH