Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02721 ATGATGGAGACCCAAGGTTCTGTAGCACTGGTGGTTGGTGTCACCGGGGTGACTGGGCTGAGCCTAGCCCAAGCCCTGAAGCAGCCGAGCTGTCTGGGAGGCCCATGGAAAGTTTACGGCGCGGCCCGCCGACCAGGGCCCAGTTGGTTCCCTCCTTCTATGGTGGACGAGTTGATCACCTTGGACGCTGTTGACTCTGGCGACACACGCGCGAAGCTTCTCCCCATAGCTGATGAGGTCACGCATCTTTTCTGGATCACCTTGCAGGTTCGTGCAGACGAAGAAGCCAACATCAGTGTCAACAAAAGCATGCTTCTCAACGTTCTCACCGCCCTCAAGTCCTCCTCTTCTTCCCGGCTGGCCCATGTAACGGTCCAAACCGGCACCAAACACTACATGGGCCCAATTTTCGACCCGGTCCTGTCCACCCAACTCGTCTGCCAGGAGCCACCCTTCGACGAGAACATGCCACGCCTCCCTTACCCCAACTTCTACTACGCGCTCGAGGATCTGGTTGAATCCCACGCGCCCTCGATTACATACTCAGTGCACCGCTCCTCCATCATATTAGGCGCCACCGCGAGAAGCTCATACAACGCGCTGTTGACGCTGGGGACCTACGCCGCAATTTGCCGCCACCTGGGGTTGGCGTTTCGGTACCCGGGAACGAAGTACACGTGGGAGCATTTCTGCGACATGACCGATGCGCGTGTCTTGGCGCAGCAGCACGTGTGGGCTGCGGTTACACCCGAGGCTAAGAACCAGGCCTTTAACTGCACGAACGGTGATGTTTTTATGTGGAAGAGCGTGTGGAAGCTGCTCGCTGAGGTTTTCGATGTGGGGTTTGTGGCGTTTGATGAAAGGGAAGAGTTTGATTTGGCGGAGCTGATGCATGATAAGGGAAGCGTTTGGGAAGAGATTGTGGAGAAATACGGGCTTTGCAATACCAAGTTGGAGGAAATTGTGTGTTATGAAGCCTTCCAAACAGTGCTACGTTTTCCGTTTCAACATGTGTCTAGTATGAGTGTAGGGAATACGGGTTTTTCGGCCATGCTGATACGTTTAAAAGTATCAGATTCTGGGTGGAGGAGCTGA 1095 0.5479 MMETQGSVALVVGVTGVTGLSLAQALKQPSCLGGPWKVYGAARRPGPSWFPPSMVDELITLDAVDSGDTRAKLLPIADEVTHLFWITLQVRADEEANISVNKSMLLNVLTALKSSSSSRLAHVTVQTGTKHYMGPIFDPVLSTQLVCQEPPFDENMPRLPYPNFYYALEDLVESHAPSITYSVHRSSIILGATARSSYNALLTLGTYAAICRHLGLAFRYPGTKYTWEHFCDMTDARVLAQQHVWAAVTPEAKNQAFNCTNGDVFMWKSVWKLLAEVFDVGFVAFDEREEFDLAELMHDKGSVWEEIVEKYGLCNTKLEEIVCYEAFQTVLRFPFQHVSSMSVGNTGFSAMLIRLKVSDSGWRS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02721 364 CDD 5beta-POR_like_SDR_a 8 312 - -
Cca11g02721 364 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 3 343 - -
Cca11g02721 364 Gene3D - 7 353 - -
Cca11g02721 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 284 IPR036291 -
Cca11g02721 364 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 3 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02721 Cca-Chr11 54585853 54587329 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02721 - - gmx:100812240 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02721 11 54585853 54587329 Cca11g02721 11 54585853 54587329 ECH