Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02719 ATGGTGAGAGCAAGAGATATAGACGACTTGCCAAAGAACGCAGCCAACTACACTGCGTTAACGCCGTTATGGTTTCTCCAAAGAGCAGCCCAGGTGCACCCCACTAGAAACTCCCTCATCCACGGATCTCGGCGCTACACGTGGCAACAAACTTACCACCGTTGCCGTCAATTTGCCTCTGCTCTTTCCAACCGTTCCATCGGTCTCGCCAAAACTGTAGCTGTTATTGCACCCAATATTCCAGCTCTTTATGAAGCTCACTTTGGAATTCCAATGGCAGGGGCTGTGCTGAACCCTGTTAACATTAGGCTAAATGCATCCACAATAGCTGAGCcaaaacccagggagcagcgtgcgcaaggagctaaggaagaagaagaaacgaaaagagtaaagtga 399 0.416 MVRARDIDDLPKNAANYTALTPLWFLQRAAQVHPTRNSLIHGSRRYTWQQTYHRCRQFASALSNRSIGLAKTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTIAEPKPREQRAQGAKEEEETKRVK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02719 132 MobiDBLite consensus disorder prediction 107 132 - -
Cca11g02719 132 Gene3D - 21 112 - -
Cca11g02719 132 PANTHER ACYL-ACTIVATING ENZYME 4 110 - -
Cca11g02719 132 MobiDBLite consensus disorder prediction 116 132 - -
Cca11g02719 132 Pfam AMP-binding enzyme 26 110 IPR000873 -
Cca11g02719 132 SUPERFAMILY Acetyl-CoA synthetase-like 14 110 - -
Cca11g02719 132 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 4 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02719 Cca-Chr11 54549905 54551270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02719 3 110 Miscellaneous Gene Families AT3G16910 76.852 2.14e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02719 K01913 - gmx:100811706 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02719 11 54549905 54551270 Cca11g02719 11 54549905 54551270 ECH