Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02712 ATGGGAGCGCCAGAAAAATCACAGGCTAACGCTAATTCGATGCAGCGTGTCAAGGTATATCGCCTGAATGATGATGGGAAATGGGATGACCAGGGTACTGGACATGTCACTGTTGATTATTTAGAGCGATCAGAAGAGCTGGGCTTGTTTGTTTATGATGAAGATGACAGTGAGACCATACTTTTGCATCGCATCAGTTCTGATGATATTTACAGGAAGCAAGAAGATACAATCATTTCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGCTTCCAAGAGCCTAGCGGCTGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCATTTTAATACATTAAATAGTGAGCCATTTCACAGTGTCAATGGTGAGCCAAGGGAGTTGCCTGCTGTTGAGCTTTCAACACTTCCTTTGATTCTCAAGACTGTGGTTGACAGTGGCTTTGCAGATCAGTTGCGGCTTACAGAACTAATATTAAGTGATCAAGAGTTTTTTCGTAAGCTGATGGAAGTATTCAGAATGTGTGAAGACTTGGAAAATATGGATGGCCTTCACATGATTTTCAAAATAGTCAAAGGGATCGTTTTGCTAAATAGTCCAGCAATTTTTGAGAGAATTTTTAGTGATGACTTTATAGTGGACATTATTGGCGCCCTCGAGTATGATCCAGAGGTTCCTTGTGTTCAACATCATCGTAAATTCTTAAAGGAGCATGTTGTTTTCAAGGAGGCCATACCTATAAAAGATCCCATTGTGTTGTCAAAGATACATCAAACATATAGAGTTGGTTTTTTGAAGGATGTTGTTCTGGCTAGAATCTTGGATGAGGGTATTAGTGCAAATCTTAACTCCATAATACATTCAAACAATGCCCATGTTGTCTCTTTGTTGAAGGATGACAGTACATTTATCCAGGAGTTGTTTTCTAGGCTAAAATCACCCACCACCTCTCAAGAATCAAAGAAGAACTTGGTTTATTTCTTGCACGAGTTTTGTAGTTTGAGCAAGAGCCTGCAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTAATGAATGAAGGCATTTTTGACGTGGTTGCCAATGTTTTGCAAAATCAAGACAAGAAGCTTGTGCTAACTGGAACAGATATCCTCATTCTTTTCCTGAATCAGGATCCTAATCTTCTACGATCCTATTTTGTTCGACAGGAAGGATTTGCTCTTCTAGGACTTTTGGTTAAGGGAATGTTAACAGATTTTGAAGAGAACATGCACTGCCAGTTTCTTGAAATTCTTCGCAATTTATTGGACTCATGCACACTGTCTGGACCACAGAGGGACACTATTATTGACATATTCTTTGAGAGGCATTTGGGGCAACTGATTGATGTTATAACAACATCTTGTCCTTCAGAAAATACAGTTGACGAAATTGGAAAATCAATAGGTCCTGGACAAAGAGTTCAGTGTCAGAGTGGAGCAAAGCCAGAGATACTATCAAACATATGTGAATTACTATGCTTTTGTGTCCTACATCATCCATACAGAATAAAGTGCAACTTTCTTCTTAATAATGTGATTGAAAAAATATTGCTACTGACTCGGAGAGCAGAAAGATACTTAGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCCCGCCACGATGAGCATCTGTTAAATTATTTTGTTAGGAATAATGTTCTCAAACCAATTATTGATGCCTTTGTTTCTAATGGCAATCGCTACAATCTGCTCCATTCTGCTGTTTTGGAACTTTTTGATTTTATTCGGAAGGAGAATATGAAATTATTGGTGAAATACGTAGTTGATACTTTTTGGGGCCAGCTGGTGAAATTCGAGTATCTGGCTTCGATTCACTCACTGAAATTAAAATATGAGCAGTCTTTGGATAATGGTGAGACAAAAGATGCCTCTACTGTAGTGGACCTACGAAGACGAAATGATGAACGTGGTCTGGAGAGAGAAGAAGAACGGTACTTTAATGAGGACAGTGATGAGGAGGATACTGCTTCTGCATCTGTTCCACGTAATCAGAAAGGACACCAGCAACCTAATCTATCCAATGGAGTTGCTGCCAGCTATTCGCAGTTATGTACAAGGTCACTGGTTGACTatgatgatgatgaggatgatgaagatTACAAGCCACCACCAAGGAAGCAGCCAGAAACTTCTGAGGAAGATGATGGGATAATGGAGTCTCTCAGGCTGAAGAGGAAATTACCTTCAAAAGATAAGGAACCTGAACTTGTGAAGAAACAGAAGTTATCAAAGAATTCTAAATCTAAAGATAGTGTTTTTGCTGCTTTGTGTTCAACATTGAGCCAAGCTGTGCTACCTAGTAAGAAACCATCAATCAGCATTCAAACAAGTGCTCGAACAGTTGAGGGGAGGGTGGTATCAAGCGAAGATAGTCAGGGAGATGTACAGAATATTTCTAGAAGCAGTTCTGATAATAGCAACATTGCAGCAGAAGATAATCACGTGGAGAAAGAAGCTGAAGCCTCTAGAAGCTTTTCTGATTGCTTGCATGCAAAATCAGATAGCAAACAATTGGGTGCAGAGGAACGTCCATTGGTTACCGCAAAATCCTCACCAGAGATGGCCGTAAATGGATCGTAA 2646 0.3976 MGAPEKSQANANSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLFVYDEDDSETILLHRISSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMHFNTLNSEPFHSVNGEPRELPAVELSTLPLILKTVVDSGFADQLRLTELILSDQEFFRKLMEVFRMCEDLENMDGLHMIFKIVKGIVLLNSPAIFERIFSDDFIVDIIGALEYDPEVPCVQHHRKFLKEHVVFKEAIPIKDPIVLSKIHQTYRVGFLKDVVLARILDEGISANLNSIIHSNNAHVVSLLKDDSTFIQELFSRLKSPTTSQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVANVLQNQDKKLVLTGTDILILFLNQDPNLLRSYFVRQEGFALLGLLVKGMLTDFEENMHCQFLEILRNLLDSCTLSGPQRDTIIDIFFERHLGQLIDVITTSCPSENTVDEIGKSIGPGQRVQCQSGAKPEILSNICELLCFCVLHHPYRIKCNFLLNNVIEKILLLTRRAERYLVVGAVRFVRTILSRHDEHLLNYFVRNNVLKPIIDAFVSNGNRYNLLHSAVLELFDFIRKENMKLLVKYVVDTFWGQLVKFEYLASIHSLKLKYEQSLDNGETKDASTVVDLRRRNDERGLEREEERYFNEDSDEEDTASASVPRNQKGHQQPNLSNGVAASYSQLCTRSLVDYDDDEDDEDYKPPPRKQPETSEEDDGIMESLRLKRKLPSKDKEPELVKKQKLSKNSKSKDSVFAALCSTLSQAVLPSKKPSISIQTSARTVEGRVVSSEDSQGDVQNISRSSSDNSNIAAEDNHVEKEAEASRSFSDCLHAKSDSKQLGAEERPLVTAKSSPEMAVNGS 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02712 881 MobiDBLite consensus disorder prediction 713 772 - -
Cca11g02712 881 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Cca11g02712 881 Gene3D - 307 614 IPR011989 -
Cca11g02712 881 MobiDBLite consensus disorder prediction 787 881 - -
Cca11g02712 881 MobiDBLite consensus disorder prediction 721 768 - -
Cca11g02712 881 MobiDBLite consensus disorder prediction 679 699 - -
Cca11g02712 881 MobiDBLite consensus disorder prediction 832 861 - -
Cca11g02712 881 SUPERFAMILY ARM repeat 174 594 IPR016024 -
Cca11g02712 881 MobiDBLite consensus disorder prediction 659 699 - -
Cca11g02712 881 PANTHER ATP SYNTHASE GAMMA-RELATED 1 819 - -
Cca11g02712 881 Gene3D - 10 127 IPR011993 -
Cca11g02712 881 PANTHER BINDING PROTEIN-RELATED 1 819 - -
Cca11g02712 881 SUPERFAMILY PH domain-like 15 111 - -
Cca11g02712 881 MobiDBLite consensus disorder prediction 787 831 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02712 K17491 - gmx:100808669 1578.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02712 11 54476802 54495185 Cca11g02712 11 54476802 54495185 ECH