Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02709 ATGTCTGATAAGAAGGAAGAGAAATCGCAGGCTGCGGCTGAAAGAATCAAGGCTGCAGCCTTGACTGCTGCTAAAGGCCTTAGTCGTGCCCAGGCTGAAAGGGCGGCGGCCGCGGCGGCCCGAAATGTCAATGCTTATGGGCAGAAAGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATCTAATGAGTACTGAGAAAGCTGTTAAATTGGGTGAAAGAAAAGACCTTAAGCCTGCAATGTCGGCTGCGGGTGGAGCGGCGCAGTGCCAAAAATGTTTCCAAAGTGGCCACTGGACATATGAATGCAAGAATGAACGGGTTTACATCTCAAGACCATCTCGGACTCAGCAACTGAAAAACCCTAAATTGAGGGTGAATGTCTCTGTGACTTATGATTTGGATGATAATATTCCTGATGCTAAGATGGAAAAGGCCAAAAAGAATTCCAAGAAAACCAAAAGGAAACATCGGTCTGACTCCAATTCAGGTAGTGATAGTGAGGATTCAGTTTTTGAGACTGAAAGTGGCAGCGGGTCATCATCTGTTACAGGATCAGATTCTTCTTCTGGAAGTAGTTCAGGTTACAGCTCCTCATCTGATTCAGAGGAAGAACGACGGCGGAGGAGGAAGAAGAAGCAAAAGAGAGGAAGACGCAGGAGCCGGAGAAAGAAGAGGCATAATCGAAGACGCTGA 714 0.4734 MSDKKEEKSQAAAERIKAAALTAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVKLGERKDLKPAMSAAGGAAQCQKCFQSGHWTYECKNERVYISRPSRTQQLKNPKLRVNVSVTYDLDDNIPDAKMEKAKKNSKKTKRKHRSDSNSGSDSEDSVFETESGSGSSSVTGSDSSSGSSSGYSSSSDSEEERRRRRKKKQKRGRRRSRRKKRHNRRR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02709 237 MobiDBLite consensus disorder prediction 145 237 - -
Cca11g02709 237 PANTHER ZCCHC10 PROTEIN 1 231 IPR039715 -
Cca11g02709 237 Pfam Zinc knuckle 91 128 - -
Cca11g02709 237 MobiDBLite consensus disorder prediction 215 237 - -
Cca11g02709 237 MobiDBLite consensus disorder prediction 171 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02709 Cca-Chr11 54465824 54466606 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02709 - - gmx:100807084 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02709 11 54465824 54466606 Cca11g02709 11 54465824 54466606 ECH