Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02701 ATGGACCATGAACCTGTTTCCACCATCAAACAAGCAAACAAAGACCTTGTGTCATCAATTAAAGAGAAGCTCGAAGCCGTTTCATCTTTGAAATCAATCTTCAGAGTCCCAGAGAAACTTGTAGAAGCAAACGACAAGATGTACATCCCTGGCACGGTTTCAATTGGTCCTCTCCATCACGGCAAGGATGCTCTAAAACACATGGAAGATCGTAAGTGGCATTACGTGTTCACACTGTTGAGCCGACAACCGAACCAGCTCGAGTCAAACCTGCACGAGTGTGTGAACGCGCTAAGCGATTTGGAGAAGCCAGCACGAAGTTTCTACGCAGAAGAACTCAGCCTCAAAAGCAACCAGTTCATAGAGATGATGCTAGTTGATGGGTGTTTCATCATTGAGCTTTTCTTGAAGTATGCTCAAAAGGGTATCAGACGCCGAGGGGACCCCGTGTTCACCACGCCAGGGTTACTCAACAGGGTAAGGTGTGACCTCATCTTGTTGGAAAACCAAATACCGCTCCTCGTTCTTCAAAAGCTATTCAAAATTGTACAACATGACATGACCCTGATGACCCTCTACGAGCTTGCCATTCGTTTCTTCAGAAATATGTTACCAGGGGATAAGGAAATTGTGAATGAGAACTTTAGCCAAGAGGGTTATCATTTGCTTGACTTAATTCGCCAGTGTTATCTACCAACCTATGCAAGAGTAGGGTCCAAAAAACGTGTATCAATAGGTGATCTTGAATGTGCAACACAGCTCAAGAATGATGGGATTAAGTCCAAGAGTTTCTCAACCAAAAGCTTACTAAACATGAATTTTTCTAATGGGGTCATTGAAGTTCCTCCCCTTCGAATCCATCGAATCACAGAAATGATATTTTCCAATCTGATAGCGTTGGAGCAGCATCAAAATGATACTCAACCGTTCACATCTTATGCCTTCTTAATGAAAGCCTTGGTCTGCAACGAAAACGATGTGAAGCTGTTCCGCCACCTGGGGATTCTGATCATCGATAATAATTATACGGAGAAAGAAGTTTGTGATATGTTCAAGAGGTTGTGCGGAAAAGTGGAATGTATGGATGATAAATTCTATTTTGCGGGGCTTATTGAACAAATATTTGAGTATAGAACTCAGAGTTCATGGAGGAAGATATTGAAATGCAGTTGGCTTAAGACTCGTACTTGA 1191 0.4249 MDHEPVSTIKQANKDLVSSIKEKLEAVSSLKSIFRVPEKLVEANDKMYIPGTVSIGPLHHGKDALKHMEDRKWHYVFTLLSRQPNQLESNLHECVNALSDLEKPARSFYAEELSLKSNQFIEMMLVDGCFIIELFLKYAQKGIRRRGDPVFTTPGLLNRVRCDLILLENQIPLLVLQKLFKIVQHDMTLMTLYELAIRFFRNMLPGDKEIVNENFSQEGYHLLDLIRQCYLPTYARVGSKKRVSIGDLECATQLKNDGIKSKSFSTKSLLNMNFSNGVIEVPPLRIHRITEMIFSNLIALEQHQNDTQPFTSYAFLMKALVCNENDVKLFRHLGILIIDNNYTEKEVCDMFKRLCGKVECMDDKFYFAGLIEQIFEYRTQSSWRKILKCSWLKTRT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02701 396 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 2 386 IPR004158 -
Cca11g02701 396 PANTHER - 2 386 - -
Cca11g02701 396 Pfam Plant protein of unknown function 33 388 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02701 Cca-Chr11 54430108 54431298 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02701 - - gmx:102668971 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02701 11 54430108 54431298 Cca11g02701 11 54430108 54431298 ECH