Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02683 ATGGCGCCTCGTTCATTCCTACTTGCTCTGCTGAGTCTCCTCCTGACTCGGTCCGAGTCGGCGCCTCAAGCCTTCCGGCGAGAATCCAGCCACCTCCAGTGGCACCACGGCGCCTTCCACGACGTCCGCGACAGCGTCCGATCCGACGTTCCGTTTCAGGTTCCGCTGGAAGTGAATGTGGTTTTGATTGGTTTCAGTGGAGACGGAGGCTATAGATACGATATCGATGCGCATCAGTTTGAACAGCTTCTCAAAACGAGCTTTCCAGTTCACAGGCCTTCGTGTCTGGAGACCGGGGAGCTACTTGATATTGAGCATCACTTGGTTTATAATGTGTTTCCTGCCGGACAGCCTGAACTGATAGCACTTGAGAAAGCACTGAAAGATGCAATGGTTCCTGCAGGAAAAGCAAGAGAGGCAACTGCCTATTTTTCTCCCTTTTTTTTAATGCTACTTTCTTCTACTGAATTTGGAAGGGAGGTACCTTCGTTTGAAGTTGAGGCAACAACTGTGGAGCCAGTATTTCAAAGGCTGTATTCCTACATATTTGACATGGATAGTGTGGGATCTTCTGTTACGGAGATGGATAGACCAGTGCCAAGTGCAATATTTATTTTAAACTTTGACAAGGTGAGAGTAGATCCCAGAAATGAGGAAATTGATCTTGATAATTTAATGTATGGCAAAATTCCTGACTTAACTGAGGAAGATATGAAAAGACAAGAAGGAGAATATATCTACCGCTATCGTTACAATGGTGGGGGAGCAACTCAGGTTTGGCTAAGCTCTGGCAGATTTCTGGTGATTGATCTTTCAGCAGGGCCATGCACTTATGGTAAGATTGAAGCTGAAGAAGGAAGTGTCTGCTCTAGAACCCTGCCAAGATTACGCAATGTGGTTCATTCTAGTAGTTCAAGCACAACTTCTCATCAATTGAGCAATGATATTTTTCTTGGACAGCTTGCTTCATTGGTATCAACCACAGTGGAACATGTTATTGCACCTGATGTGAGGTTTGAAACTGTTGATCTTACTTCAAGACTGCTTATACCAATAATTGTCTTGCAAAATCATAATCGATACAACATTATGGAAAAGGGCCACAATTACAGTATTAACATAGAAGAAATTGAGGCAGAGGTGAAAAGTATGCTTCATGATGGGCAAGAATTAGTAATTATTGGGGGTGCACATTCATTACATCGCCATGAAAAGCTGGCAATTGCTGTTTCAAAAGCTATGCGTGGACATTCCCTGCAGGAAACCAAGAATGATGGTCGTTTCCATGTTCATACCAAGACATATTTGAATGGTGCTATTTTAAAAGAAGAAATGGAACGTTCTGCTGATGTACTAGCTGCTGGATTGCTTGAAGTGGCAGAACCATCTCTTTCAAGTAAATATTTCCTTCGCCAGAATTGGATGGATGAATCTGAAGGATCAACTGATTCTATTCTTAAGCATAAGCCTCTTTGGTCTTCATATAACTCAAAATATGGCaagaaaaggagaaagaaagaaaagaaacaaGGGGATCTACAACCAACTTATGGAACTAGAGTAATTCCTGTCTTTGTGCTATCAATGGCAGACGTGGATCCAAACCTTATGATGGAGGATGAAAGTATGGTATGGACAAGCAATGATGTTGTCATTGTGCTTGAACATCAAAATGAAAAGATTCCTTTAAGTTACGTTTCAGAAACACAGAAAAGGCATGCTATTCCATCTCAGGCACAACGGCATATATTGGCTGGTCTTGCCTCAGTTGTAGGTGGTTTAAGTGCGCCATATGAAAAGGCTTCTCATGTACATGAAAGGCCTGTTGTGAATTGGCTTTGGGCGGCTGGTTGTCATCCATTTGGACCATTCTCTAATACATCTCACATCAGTCAAATGCTCCGAGATGTTGCTTTGAGGAACTCAATATATGCCCGTGTGGATTCTGTACTTCATAAAATTCGTGATACGTCAGAGACTGTCCAAGCTTTTGCAGCAGAGTATCTGAAAACTTCCCTTGGTGAACCAGTAAAGGGAAAGAAAGAAAAGTCAAACACTGAACTGTGGTTAGAGAAATTCTACAAGAAAACTACTAATTTGCCCGAACCCTTCCCACATGAATTAGTTGATCGCTTAGAAAGATATCTGGATGGCCTTGAGGAGCAGCTTGTTGATATGTCTTCACTATTATATGATCATCGGTTACAGGATGCCTACTTGAACAGTTCAGATATTCTGCAGAGCACCATGTTCACCCAACAATATGTTGACCATGTCTTGGTCAGCGAGAGGGATAATATGAGATGCTGCAAAATTGAGTACAAATATCCCGTGCATTCCTCTCAAACTTATATCTATGGGGGAATACTTATTGCTGGATTCGTTGTATACTTTGTTGTAATTTTTTTCTCATCTCCAGTGCGCTGA 2427 0.4174 MAPRSFLLALLSLLLTRSESAPQAFRRESSHLQWHHGAFHDVRDSVRSDVPFQVPLEVNVVLIGFSGDGGYRYDIDAHQFEQLLKTSFPVHRPSCLETGELLDIEHHLVYNVFPAGQPELIALEKALKDAMVPAGKAREATAYFSPFFLMLLSSTEFGREVPSFEVEATTVEPVFQRLYSYIFDMDSVGSSVTEMDRPVPSAIFILNFDKVRVDPRNEEIDLDNLMYGKIPDLTEEDMKRQEGEYIYRYRYNGGGATQVWLSSGRFLVIDLSAGPCTYGKIEAEEGSVCSRTLPRLRNVVHSSSSSTTSHQLSNDIFLGQLASLVSTTVEHVIAPDVRFETVDLTSRLLIPIIVLQNHNRYNIMEKGHNYSINIEEIEAEVKSMLHDGQELVIIGGAHSLHRHEKLAIAVSKAMRGHSLQETKNDGRFHVHTKTYLNGAILKEEMERSADVLAAGLLEVAEPSLSSKYFLRQNWMDESEGSTDSILKHKPLWSSYNSKYGKKRRKKEKKQGDLQPTYGTRVIPVFVLSMADVDPNLMMEDESMVWTSNDVVIVLEHQNEKIPLSYVSETQKRHAIPSQAQRHILAGLASVVGGLSAPYEKASHVHERPVVNWLWAAGCHPFGPFSNTSHISQMLRDVALRNSIYARVDSVLHKIRDTSETVQAFAAEYLKTSLGEPVKGKKEKSNTELWLEKFYKKTTNLPEPFPHELVDRLERYLDGLEEQLVDMSSLLYDHRLQDAYLNSSDILQSTMFTQQYVDHVLVSERDNMRCCKIEYKYPVHSSQTYIYGGILIAGFVVYFVVIFFSSPVR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02683 808 Coils Coil 709 729 - -
Cca11g02683 808 PANTHER BNAC01G21930D PROTEIN 7 806 - -
Cca11g02683 808 PANTHER TRANSMEMBRANE PROTEIN-RELATED 7 806 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02683 - - gmx:100790294 1447.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02683 11 54257191 54265071 Cca11g02683 11 54257191 54265071 ECH