Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02674 ATGGACGCCGACAACGCTTCCAACAACGCCGACGCTCCTATGCAAATGGATTCCGGCGACTCTCCCGCCGCTCAAGCAAAAGACAAAGAAAAAGAAGAACTAACAGAGACTATGAACAAGCTGCATATCGAGGGATCCTCGTCTGGGAATGGATTGCCTAACTTCAGAAGAAAACCGGTTATTATCATAGTTGTTGGAATGGCGGGGAGCGGGAAAACAACGCTTCTCCATAGTTTGGTTTGTCATACTCATTTGAAAAACATTCGGGGTTATGTGGTGAATCTCGACCCCGCCGTCATGACACTCCCATATGCTGCTAACATTGATGTAAGAGACACTGTTAAATACAAAGAAGTCATGAAACAGTTCAACCTTGGTCCTAATGGTGGAATTTTGACTTCCCTGAACTTGTTTGCCACCAAGTTTGATGAGGTAATTTCTGTTATTGAAAGACGGGCAGATCAACTTGACTATGTTCTAGTGGATACCCCTGGTCAGATTGAAATATTCACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGGTTTTGCATCCACATTTCCCACTGTAGTCACCTATGTAGTTGATACTCCTCGTTCAGAAGATCCCACCACTTTCATGAGCAACATGCTGTATGCTTGTAGTATCCTCTATAAGACAAGGTTACCTCTCATCTTGACGTTCAACAAGGTTGATGTAGCAGCGCATCAGTTTGCCTTGGAGGTATTGTTTATTTCAGATGAATTTTCTTGTGTTTAG 759 0.4348 MDADNASNNADAPMQMDSGDSPAAQAKDKEKEELTETMNKLHIEGSSSGNGLPNFRRKPVIIIVVGMAGSGKTTLLHSLVCHTHLKNIRGYVVNLDPAVMTLPYAANIDVRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEGFASTFPTVVTYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEVLFISDEFSCV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02674 252 Pfam Conserved hypothetical ATP binding protein 64 242 IPR004130 -
Cca11g02674 252 MobiDBLite consensus disorder prediction 1 35 - -
Cca11g02674 252 MobiDBLite consensus disorder prediction 1 15 - -
Cca11g02674 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 245 IPR027417 -
Cca11g02674 252 Gene3D - 59 250 IPR027417 -
Cca11g02674 252 Coils Coil 24 44 - -
Cca11g02674 252 CDD GPN1 60 241 - -
Cca11g02674 252 PANTHER GPN-LOOP GTPASE 23 243 - -
Cca11g02674 252 PANTHER XPA-BINDING PROTEIN 1-RELATED 23 243 IPR004130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02674 Cca-Chr11 54134624 54137987 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02674 K24104 - gmx:100797318 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02674 11 54134624 54137987 Cca11g02674 11 54134624 54137987 ECH