Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02671 ATGAGGAGAAGCTCACTTTATATGTCATCTTTTCTACTCCACATTCTTCTTCTATCTTGTATTCTCTTCACACCTACTCATTCCTCTGATGGGGATGAGGATGGTGATTTGGTAGACCAAATATGCAGAAAAACACCCTTTTATGACCTTTGCAGCTCCATCTTACACTCAAATCCTTTAGCCCCCAAAAGTGATCCAAAGGGTATGGCCCTCATAATGGTCAATGACATTCTGGCTAATGCCACTGACACACTTGGTTACATTGAAGAGTTGATCAAGGAAACCTCAGATGAAAAATTGGAGCAACAATTGGCCTTTTGTGCTGAGTCATACATCCCAGTTGTGAAGTACATTATTCCACAAGCAGCTGATGCCATTAGCCAAGGTCGATTTGGGTTTGCCAGTTACTGCATATTAGATGCTCAGAAGGAAGTAAATGCTTGCGACAAGAAATTTTCTGGCTCAAATCAGGCACCCTTAGGTGACAGAAATGACATTATGCAGAAGCTCGTGGATGTGGCTGCAGCAATAGTTAAACTATTATTAAATGGCTGA 555 0.4144 MRRSSLYMSSFLLHILLLSCILFTPTHSSDGDEDGDLVDQICRKTPFYDLCSSILHSNPLAPKSDPKGMALIMVNDILANATDTLGYIEELIKETSDEKLEQQLAFCAESYIPVVKYIIPQAADAISQGRFGFASYCILDAQKEVNACDKKFSGSNQAPLGDRNDIMQKLVDVAAAIVKLLLNG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02671 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 182 IPR035513 -
Cca11g02671 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 184 - -
Cca11g02671 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 181 IPR006501 GO:0004857
Cca11g02671 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 184 - -
Cca11g02671 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 181 IPR035513 -
Cca11g02671 184 CDD CIF_like 36 181 IPR034087 GO:0004857|GO:0043086
Cca11g02671 184 Pfam Plant invertase/pectin methylesterase inhibitor 36 177 IPR006501 GO:0004857
Cca11g02671 184 SMART PMEI_2 33 177 IPR006501 GO:0004857
Cca11g02671 184 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02671 Cca-Chr11 54111459 54112248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02671 - - gmx:100788167 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02671 11 54111459 54112248 Cca11g02671 11 54111459 54112248 ECH