Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02670 ATGCAACTTAGGCACTATCATTTTGTCTTCCAACGATTAACAATGACAAACTCTAAGTCCCTAATTGTCTTCTTTTCTCTCCAAGCCATGGTTGTTATGATTTCAATAATACCATCGAGCCACTGCAGAACCTTGCATCGAAACGATGAAAGGCTGATAGAGAGCACTTGCAAGAAGACACCCAACTACAATGTTTGCCTTCAATATCTCAAGGCAAGCCCTGAGAGCTCCAGTGCTGACGTCACAGGGCTGGCTCTGATCATGGTCAAAGTGATTAAGGCAAAGGCAAACGATGCCTTAAAAATAATTCATGAGTTGCAAAGGGTTGGATCAGGGCCTAAGCAAAGGAAAGCCTTGAGTTCTTGTGCTGACAAATACAAAGCAATTTTAATTGCTGATGTGCCACAAGCCACTGAAGCTCTGCAGAAGGGGGACCCCAAGTTTGCTGAAGATGGGGCTAATGATGCTGCCAATGAGGCTACGTATTGTGAGAATGAATTCTCTGGGAAATCACCCCTCACCAAACAGAACAATGCTATGCATGATGTTGCAGCTGTCACAGCGGCTATTGTCAGATTGTTGCTCTAG 588 0.4439 MQLRHYHFVFQRLTMTNSKSLIVFFSLQAMVVMISIIPSSHCRTLHRNDERLIESTCKKTPNYNVCLQYLKASPESSSADVTGLALIMVKVIKAKANDALKIIHELQRVGSGPKQRKALSSCADKYKAILIADVPQATEALQKGDPKFAEDGANDAANEATYCENEFSGKSPLTKQNNAMHDVAAVTAAIVRLLL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02670 195 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 31 195 - -
Cca11g02670 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 31 195 - -
Cca11g02670 195 CDD CIF_like 50 194 IPR034087 GO:0004857|GO:0043086
Cca11g02670 195 SMART PMEI_2 48 190 IPR006501 GO:0004857
Cca11g02670 195 Pfam Plant invertase/pectin methylesterase inhibitor 52 190 IPR006501 GO:0004857
Cca11g02670 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 194 IPR035513 -
Cca11g02670 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 194 IPR006501 GO:0004857
Cca11g02670 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 195 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02670 Cca-Chr11 54104370 54105313 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02670 - - gmx:100500640 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02670 11 54104370 54105313 Cca11g02670 11 54104370 54105313 ECH