Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02664 ATGACGCTCGCCGGACTCTTCCTCACCGCAACCAAGCTCGCCGGAGCTCTCGTCACTCTTTTCGTCGCCGTCAACGCCTTCTCCTACTCCCGTTTCCGCAACAAGAACCTTCGCAAGTTCCGCTCCCCTATCGACGAATCCTCCGACACTCTCGCACTCTTTAACGTCGCCGAAGGCGAAGATGGATTTTTCTTTGGGTTGGCGACAGCGCCAGCACATGTTGAGGATAGGCTTGATGATGCTTGGATCCAGTTTGCTGAGGAAAAGTGTGGCGAAGGTGGTGGTGACTCGGAGGGGAAGCAGAGAGCGGATGCTGTGATTGGTTCTGCTTCTGCCGACGGTGGGTCCCAGCAGGCCGTAACATCTCCGCGGGGCAGGAAGCCTCTTAAGGTGGCGATGGAGGCCATGATTAGGGGACTTGAGAAGTACATGGAAGTGGAAGGGCAAGAAGAAGAAGAACCGCGTCCTAATGTAACTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGGTTTTGGTCTGATCCTGAAACAGAAATAAAATTGGCCAAGGATACTGGTGTGAGTGTTTTTCGCATGGGAATAGATTGGTCAAGGATCATGCCAGTGGAGCCAGTAAACAGCCTTAACGAATCTGTTAACTATGCTGCGTTGGAACGGTATAAGTGGATAATCAATAGGGTTCGATCAGATGGAATGAAGGTCATGCTCACTCTTTTTCATCACTCACTTCCACCCTGGGCTGGTGAATATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTTGCAGATTTGGTAGACTATTGGGTAACATTTAATGAGCCCCATGTCTTCTGTATGCTAACTTATTGTGCTGGAGCTTGGCCTGGTGGTCATCCTGATATGCTTGAGGTTGCTACTTCTGCACTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATCGCACACTCAAAGGCATATGACTACATCCACGAACTAAGTAACTCATCAAATCCAATAGTCGGTGTAGCACATCATGTGTCATTTATGCGACCCTATGGTCTGTTTGATATTGCTGCTGTTTCGCTGGCTAATTCATTGACTATCTTCCCATACATTGATGGAATATCTGACAAGCTGGACTTCATAGGAATAAATTACTATGGGCAGGAAGTGATTTCGGGTGCAGGCCTGAAGCTGGTGGAAAATGACGAGTACAGTGAATCTGGTCGTGGCGTATACCCTGATGGCTTATACCGCATGTTGCTTCAGTTCCATGAAAGATACAAACATCTAAACATTCCCTTCATCATTACTGAAAATGGGGTTTCAGATGAGACAGATTTGATCCGCCGGCCATATATCTTTGAGCATTTGCTTGCTGTTTATGCTGCCATGATCATGGGTGTGCCCGTGCTTGGATACCTATTCTGGACTATTTCTGATAACTGGGAGTGGGCCGATGGATATGGTCCCAAGTTTGGACTTGTTGCAGTTGATCGGGCAAACAATCTTGCACGGATCCCTCGTCCATCTTACCATCTGTTTTCTAAAGTTTGA 1587 0.4776 MTLAGLFLTATKLAGALVTLFVAVNAFSYSRFRNKNLRKFRSPIDESSDTLALFNVAEGEDGFFFGLATAPAHVEDRLDDAWIQFAEEKCGEGGGDSEGKQRADAVIGSASADGGSQQAVTSPRGRKPLKVAMEAMIRGLEKYMEVEGQEEEEPRPNVTAWHNVPRPEERLRFWSDPETEIKLAKDTGVSVFRMGIDWSRIMPVEPVNSLNESVNYAALERYKWIINRVRSDGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVNSVADLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEVATSALPTGVFQQAMHWMSIAHSKAYDYIHELSNSSNPIVGVAHHVSFMRPYGLFDIAAVSLANSLTIFPYIDGISDKLDFIGINYYGQEVISGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLNIPFIITENGVSDETDLIRRPYIFEHLLAVYAAMIMGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02664 528 PANTHER GALACTOLIPID GALACTOSYLTRANSFERASE SFR2, CHLOROPLASTIC 4 528 - -
Cca11g02664 528 SUPERFAMILY (Trans)glycosidases 146 528 IPR017853 -
Cca11g02664 528 Pfam Glycosyl hydrolase family 1 384 528 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 Pfam Glycosyl hydrolase family 1 178 363 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 PRINTS Glycosyl hydrolase family 1 signature 388 402 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 PRINTS Glycosyl hydrolase family 1 signature 457 468 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 PRINTS Glycosyl hydrolase family 1 signature 478 495 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 PRINTS Glycosyl hydrolase family 1 signature 502 514 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 PRINTS Glycosyl hydrolase family 1 signature 445 453 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 ProSitePatterns Glycosyl hydrolases family 1 active site. 445 453 IPR018120 -
Cca11g02664 528 PANTHER GLYCOSYL HYDROLASE 4 528 IPR001360 GO:0004553|GO:0005975
Cca11g02664 528 Gene3D Glycosidases 141 528 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02664 6 528 Glycoside Hydrolase AT3G06510 62.877 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02664 K21362 - gmx:100792401 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02664 11 54041277 54048136 Cca11g02664 11 54041277 54048136 ECH