Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02661 ATGACTAGTGGTAGCTGTATTGGAATCTCTACCATGAAGCCTTGTTGTAGAATCCTAAGTAGCTATAAAAGTCCATTGCTTTTTGGGTTTTCTCCAACCAAAGTCAGTGATTCAATAATCATGGGTATGTTGTCCAGATCAGGTCATCACATCTCAACCCATCAGCATAAATACAATACCTGTAATACTCAGATTTTAGGGTATAAACATGAGATCAATTCAAATCGGAGAGATTTTAGTGTTTCCGGTTCGAATTGGGGTCTTTATAGGAATTTTAGCACTAGTTTTTGTGTCAATATTGGTAGTTTTAGGCCTAGAGTTGTGTCCTTGGTACCGCATGTAGCGTCGGATATTAGGAACCATTCTACATCGGTTGATTCACATGCTCGCGATACAAGCTTTGAGAAGATTTACATTCAAAATGGCTTGAATGCGAAGCCGTTGGTAATTGATAGAATTGAGACTGACCAAAGTAACTTGGACTTCGAGGAGGTCTCTGAAAATGAGTCAAGTGTAAATATAGATAATTTGAAGGATTTGAGTGAGAATAAGGTTCAGAGGGAGGTGTCTGAGATTGAAAAGGAAGCTTGGAAATTGCTTGAGGATGCTGTTGTCACTTACTGTGGGAATCCGGTTGGCACTGTTGCAGCTAATGATACTGCTGACAAACAACCGCTGAACTATGATCAAGTTTTTATCCGTGATTTCGTTCCATCAGCACTTGCCTTTTTGCTCAATGGTGAAGGGGAAATTGTCAAGAATTTTCTACTTCACACGTTGCAATTACAGAGTTGGGAGAAGACTGTTGACTGCTACAGCCCAGGGCAAGGGTTGATGCCAGCAAGCTTCAAGGTTAGAGCTGTGCCTCTTGACGGAAGCAATGAAGCATTTGAGGAAGTTTTGGATCCTGATTTTGGTGAATCAGCTATTGGTCGTGTTGCACCTGTTGATTCAGGATTATGGTGGATTATATTATTGAGAGCTTATGGGAAATTAACTGGTGACTATGATTTGCAAGATAGAGTGGATGTCCAAACAGGCATAAGACTGATCCTTAAGTTGTGCCTGACTGACGGATTTGACATGTTTCCTTCTCTATTAGTCACTGATGGCTCCTGCATGATTGATAGAAGGATGGGTATTCATGGTCACCCTCTTGAGATCCAGGCATTATTTTACTCAGCTTTACGCTGCTCTCGTGAGATGCTGATAGTTAATGATGCAACTAAGAACCTGGTGGCTGCTGTTAGTAATCGCTTGAGTGCACTCTCCTTTCACATGAGAGAGTATTATTGGGTTGATATGAAGAAGATTAATGAAATTTATCGGTATAAGACGGAAGAGTACTCTACTGATGCTGTCAACAAGTTTAACATCTATCCAGAGCAAATTCCTTCATGGCTGGTAGACTGGATCTCTGATGAAGGTGGATACTTCATTGGCAATTTGCAACCTGCTCATATGGACTTCAGGTTTTTCACTCTTGGAAACCTTTGGGCTATTGTTTCTTCTTTAGGAACAACAAAACAGAACCAGGGCATTTTGAATTTAATTGAGGCCAAATGGGACGATATCATTGCTCAAATGCCTCTCAAGATTTGTTATCCAGCGCTTGAGGGTGAAGAATGGCGTATAATCACTGGCTGTGACCCCAAGAACACCCCTTGGTCATATCATAATGGGGGATCTTGGCCGACCCTTCTCTGGCAGTTCACACTAGCCTGCATGAAGATGGGAAGGCCTGATTTGGCACAAAAAGCAGTTGATTCAGCAGAGAAAAGGCTATCTATGGATAGATGGCCTGAATATTACGATACCCGAAATGGAAGGTTCATTGGGAAGCAATCGCGGTTGATGCAGACTTGGACCATTGCTGGTTTCTTGACTTCAAAGATGCTTCTAGAGAATCCAGAAAAGGCATCCTTGTTGTTTTGGGAGGAGGATTTTGAACTTCTTCAGAACTGTGTCTGCATGCTAAGCAAAACTGGTAGAAAGAAGTGTGCCCGTTTTGCTGCGAGATCTAAGTTTCTTGTTTAA 2037 0.4173 MTSGSCIGISTMKPCCRILSSYKSPLLFGFSPTKVSDSIIMGMLSRSGHHISTHQHKYNTCNTQILGYKHEINSNRRDFSVSGSNWGLYRNFSTSFCVNIGSFRPRVVSLVPHVASDIRNHSTSVDSHARDTSFEKIYIQNGLNAKPLVIDRIETDQSNLDFEEVSENESSVNIDNLKDLSENKVQREVSEIEKEAWKLLEDAVVTYCGNPVGTVAANDTADKQPLNYDQVFIRDFVPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRAVPLDGSNEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYDLQDRVDVQTGIRLILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLIVNDATKNLVAAVSNRLSALSFHMREYYWVDMKKINEIYRYKTEEYSTDAVNKFNIYPEQIPSWLVDWISDEGGYFIGNLQPAHMDFRFFTLGNLWAIVSSLGTTKQNQGILNLIEAKWDDIIAQMPLKICYPALEGEEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACMKMGRPDLAQKAVDSAEKRLSMDRWPEYYDTRNGRFIGKQSRLMQTWTIAGFLTSKMLLENPEKASLLFWEEDFELLQNCVCMLSKTGRKKCARFAARSKFLV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02661 678 Pfam Alkaline and neutral invertase 196 637 IPR024746 GO:0033926
Cca11g02661 678 PANTHER - 5 677 IPR024746 GO:0033926
Cca11g02661 678 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 5 677 - -
Cca11g02661 678 Gene3D - 223 626 IPR012341 GO:0005975
Cca11g02661 678 SUPERFAMILY Six-hairpin glycosidases 204 629 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02661 Cca-Chr11 54012292 54016920 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02661 - - gmx:100791877 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02661 11 54012292 54016920 Cca11g02661 11 54012292 54016920 ECH