Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02649 ATGGCGGAGGACCTTGCTCAGATCGCTCACTTGCTGGACCAAACACTCAACCACGACGCTGCCGCCGTCCGCTCCGCCACCGATGTGCTCGATCGCCTCTCCCTCACTCCGCACTTCCCATTCTATCTCCTCTCCATTTCCACCGGAGCAGGAAATCAAGGTCAGAAAATCGCCGCTGCTACCTACCTGAAGAACCTCACTCGTCGAAACGTCGATAGCACCACCGGCGTCGCGCCTTCGAACGTCAGCAATGAGTTCAAGGAGCAGCTATTGCAAGCTCTGCTCCAGGTCGAGTTGTCCGTTCTCAAGATTTTAGTTGAAGTGTTCCGCTCCATTGCTGTTGCTGATTTTGTTAAGCAGAACGCGTGGCCAGAGCTTGTGCCTAATTTGCAATCTGCTATTCAGAATAGCCATCTGATCAGCGGTGTGAACGGGAAATGGAATACCGTAAATGCACTTCTTGTTCTCCATGCTCTTCTCAGACCATTCCAGTACTTTTTGAATCCTAAAGTGGCAAAGGAGCCGGTACCACCACAGTTGGAGCTTATATCCAAAGAAATTCTTGTGCCTTTGCTTACTGTTTTCCATCAATTTGTTGAAAAGGCTTTAGCAACCCATGGAAGGACAGAAAAAGAAATTGAGAAAGCCCTCCTCACTATATGCAAATGCCTTCATTTTGCAGTGAGGTCCTACATGCCATTGACTTTGGCTCCTCTTTTGCCTTCATTCTGTCGGGACCTAATGAGCATTTTGGGTTCTCTGTGCTTTGATTGTTTGGTCAATCAAGAAGATGAATATTTGACAAGATTGAAGACTGGAAAAAGAAGTCTGCTTATTTTTTCTGCCCTTGTAACCCGGCACAGGAAACATTCTGATAAGTTGATGCCAGAAATTATAAGTTGTGTTTTAAACATAGTCAAATTTAGCAAAAATACCAGTAAACTTCCTTTCCTATCAGAGAGGCTTTTGTCCCTAGGTTTTGATGTAATTTCAAATGTACTGGAGACTGGGCCGGGATGGCGATTAGTCTCTCCACATTTTACAACTTTATTGGAATCTGCAATCTTCCCGGCATTAGTAATGAATGAGAAGGATGTGTCAGAGTGGGAAGAAGACCCAGATGAGTATATCCGGAAGAATCTTCCTTCAGATATAGGTGAAATTTGTGGGTGGAGAGAGGATTTGTTCACAGCCAGAAAAAGTGCAGTGAACTTACTTGGTGTTATTTCAATGTCAAAGGGTCCACCAATGGAGACTGCCTCCGACAGTTTATCAGCTTCATCCAAGCGTAAAAAAGGTCAAAAGAACAAAAGAAGCAACGAACGCCGCTCTATGGGGGAGTTATTGGTGCTTCCATTTTTGTCCAAGTTTTCCATTCCTTCCGATTCCAATGTGTCTCAAAAGAAAATCTTAAATGATTACTTTGGCGTTCTGATGGCATACGGTGGCCTGCTAGATTTTTTGAGGGAACAAGAACCTGAATCTGTAACAACTCTAGTTCGTACACGGATCTTGCCACTGTATACAGTAGCTGTGTCCCTACCATACCTAGTTGCTAGTGCAAACTGGGTACTTGGAGAACTAGGCTCCTGTCTACCAGAAGAGATGAGTACTGATGTATATTCCCAGATGCTCATGGCATTGGTCATGCCAGATAAGCAGGAGCCTTCTTGCTATCCAGTGCGGGTTTCTGCTGCTGGGGCAATTACCACACTGCTTGATAATGACTGCATGCCCCCTGATTTTCTACCCCTTCTCCAAGTAATAGTTGCCAACATTGGAAATGATGAGGGCGAGAGCGAGAGCGAGAGTTCCATCTTATTTCAGCTTCTCAGTTCTATTATGGAAGCTGGAGATGAGAAAGTTGCAGTCCATATCCCACATATTGTCTCATCAATAGTGGGTACAGTATCAAAATGGTTAACTGCCAATATGGAGCCTTGGCCTCAAGTGGTTGAACGTGCAATTGCTGCTCTGGCAGTTATGGGTCAGACTTGGGAAGGCTCTAGGCCTGAGGAGTCTGAGTTGGATGAGTCTCGTGAAAAATGGGCTGCAGGTCAAGTGGCAGTTGGTAGAGCTTTTGCTGCACTCTTGCATCAGGCTTGGCTTACCCCTCAATGCACACTGGATCAAGAAGACCAGCAGTGTCCCCCCTCATCATGCATAGAAGATTTGTCAACATTGCTACAGTCTGTCTTGCTATCTATTGATGGAAGTCACATGATTCGTGAGCTTAAAGTATCAGAGCTGCTGTCAGTTTGGGCTGAAATGATCGCAGAGTGGCATGCATGGGAGGAATCAGAGGATTTATCAATTTTTGGGGTGATTAAGGAAACTGTGAATTTAGATCGTAAGTATAGGCTGAAAAACTTCATTGTAAAAGAGACGCCACCCCCTCCAGCTCCACCTGTTCCTGAACGTTCAATTGTAGAGGGCATTGGCGCTTTCATCAGTGAGGCAATTAAGCAATATCCTTCTGCAACACTGAGAGCTTGTTCATGTGTCCATATATTACTACATTGTCCAACCTACTCACATGACACTGAAGGTGTAAAGCAGTCATTGGCTATTGCATTTAGTAGGGCAGCCTTCTCTCACTTCATTGAAGTTCAAAGCACGCCTGGTTCACTCTGGAAGCCTCTATTGCTTGCTATATCTTCATGTTATTTGTGTTATCCTGATATTATAGAAGGTATTCTGGAAAAGGGTGCACATGGAGGCATAACAATATGGGCATCTGCTCTGTGTCATATATCCAATAGATCTTTTGAGCCTGGTCTGATGGTGGAGGCTGAGATGAAGTTAATGGTGATGACGTTAGCCCGATTGATTGAGCAACTTATCAAACAAGGGAAGTCTGGTGGTGGTGGAATTCAAAACTGCTTTGCTTCACTGTTGGAGGTATCTGTACGATTGAAAGAAGCATATGACGAGAAAGAAGATGAACAAGGATCtgatgatgctgaaaatgatgatgacgaggaggaggaggaggaggaggatagtgacaatgatgattatgatgagGACTCTGAGACTGAGGAATATGAAGAAACTGAAGAAGAATTTCTTAATAGGTATGCTAAAGCTGCTGAGGCATTAGAAAACGGTTCAAATAATATTGAAGAGGTGGACGTTGAAGATCAAGAACTGGAGCTGGAATTAGGTCAATTAATTGATGTTGATGAACAAAAGATCTTGACGTCGTTGATAGAGAAGTACCACCAATTGCTCAAACGAGAACTAGTTTTGCCATCGGAGCTCGTCATGAATTTCCTGAATGCCTTCCCTGTGTACGATTCATATTTCCAGCAATACAGATAA 3324 0.4323 MAEDLAQIAHLLDQTLNHDAAAVRSATDVLDRLSLTPHFPFYLLSISTGAGNQGQKIAAATYLKNLTRRNVDSTTGVAPSNVSNEFKEQLLQALLQVELSVLKILVEVFRSIAVADFVKQNAWPELVPNLQSAIQNSHLISGVNGKWNTVNALLVLHALLRPFQYFLNPKVAKEPVPPQLELISKEILVPLLTVFHQFVEKALATHGRTEKEIEKALLTICKCLHFAVRSYMPLTLAPLLPSFCRDLMSILGSLCFDCLVNQEDEYLTRLKTGKRSLLIFSALVTRHRKHSDKLMPEIISCVLNIVKFSKNTSKLPFLSERLLSLGFDVISNVLETGPGWRLVSPHFTTLLESAIFPALVMNEKDVSEWEEDPDEYIRKNLPSDIGEICGWREDLFTARKSAVNLLGVISMSKGPPMETASDSLSASSKRKKGQKNKRSNERRSMGELLVLPFLSKFSIPSDSNVSQKKILNDYFGVLMAYGGLLDFLREQEPESVTTLVRTRILPLYTVAVSLPYLVASANWVLGELGSCLPEEMSTDVYSQMLMALVMPDKQEPSCYPVRVSAAGAITTLLDNDCMPPDFLPLLQVIVANIGNDEGESESESSILFQLLSSIMEAGDEKVAVHIPHIVSSIVGTVSKWLTANMEPWPQVVERAIAALAVMGQTWEGSRPEESELDESREKWAAGQVAVGRAFAALLHQAWLTPQCTLDQEDQQCPPSSCIEDLSTLLQSVLLSIDGSHMIRELKVSELLSVWAEMIAEWHAWEESEDLSIFGVIKETVNLDRKYRLKNFIVKETPPPPAPPVPERSIVEGIGAFISEAIKQYPSATLRACSCVHILLHCPTYSHDTEGVKQSLAIAFSRAAFSHFIEVQSTPGSLWKPLLLAISSCYLCYPDIIEGILEKGAHGGITIWASALCHISNRSFEPGLMVEAEMKLMVMTLARLIEQLIKQGKSGGGGIQNCFASLLEVSVRLKEAYDEKEDEQGSDDAENDDDEEEEEEEDSDNDDYDEDSETEEYEETEEEFLNRYAKAAEALENGSNNIEEVDVEDQELELELGQLIDVDEQKILTSLIEKYHQLLKRELVLPSELVMNFLNAFPVYDSYFQQYR 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02649 1107 ProSiteProfiles Importin-beta N-terminal domain profile. 26 96 IPR001494 GO:0006886|GO:0031267
Cca11g02649 1107 Gene3D - 2 664 IPR011989 -
Cca11g02649 1107 MobiDBLite consensus disorder prediction 980 1021 - -
Cca11g02649 1107 PANTHER IMPORTIN-7, 8, 11 4 1105 - -
Cca11g02649 1107 Pfam Importin-beta N-terminal domain 26 96 IPR001494 GO:0006886|GO:0031267
Cca11g02649 1107 MobiDBLite consensus disorder prediction 976 1022 - -
Cca11g02649 1107 SUPERFAMILY ARM repeat 1 1021 IPR016024 -
Cca11g02649 1107 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 1105 - -
Cca11g02649 1107 MobiDBLite consensus disorder prediction 416 441 - -
Cca11g02649 1107 Coils Coil 1034 1054 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02649 - - gmx:100782006 1808.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02649 11 53760323 53769973 Cca11g02649 11 53760323 53769973 ECH