Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02566 ATGAAAACTGTTTCTCCTCTGGAAGCCCAAGCCTTCAACTACTTGAGCTTCGGTTTCCTCAGCCTCCTCAACAACTTCTGGACCTGGCTCGCCCTCAGTTTCTGGAGGACCCAAACCCCCAACCCCGAATTGCTCCCACCACCCCATGCCCCGATTCCCCACGAAGCGGGCCCCGTTGCCGTAACTGGGCCTGCTCCATCTGTGCCCGTTGACGGGCCCACCAAGGGGAAGTTTACCTTGTACTTCGAGGATGATGAGATCGAGAGGGAATGCGAGAGCGAGGTAACGGTAACGGAGGAGATTGACGGGAGAGGGGAGTGGTGGGAGAGCTGGGAAAGCTCCTTGAGGATGAGACGAGGAGAGAACGAGAAGGGTTGGTACACGTGTCAGGATTTGACGGCGCTTAACGGTAGCGTTGTCAAGTTATGGATGCCTTCTGCCTTCACCACCAGGGATAGTTCAACCTGTGTTTTTCTATATGCTAATAATACTCATCTTACCAATACAATATTCTTAAATTAG 522 0.5268 MKTVSPLEAQAFNYLSFGFLSLLNNFWTWLALSFWRTQTPNPELLPPPHAPIPHEAGPVAVTGPAPSVPVDGPTKGKFTLYFEDDEIERECESEVTVTEEIDGRGEWWESWESSLRMRRGENEKGWYTCQDLTALNGSVVKLWMPSAFTTRDSSTCVFLYANNTHLTNTIFLN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02566 173 PANTHER TRANSMEMBRANE PROTEIN 5 153 - -
Cca11g02566 173 PANTHER PROTEIN, PUTATIVE-RELATED 5 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02566 Cca-Chr11 52877300 52878038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02566 - - gmx:100806863 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02566 11 52877300 52878038 Cca11g02566 11 52877300 52878038 ECH
Cca11g02566 11 52877300 52878038 Cca08g01361 08 41020205 41021876 PCT