Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02141 ATGGCCAAGAGAAATGTTGCTGGTAATTCTTCTTTTGAGAAGACTAGCTTGGCTTCTATGGATCAAAAGTTGGCCATGGCCAAGCGCTGTTCTCATGAGGGCGTGATGGCAGGAGCTAAGGCTGCAGCTGTTGCTAGCATTGCCACTGCCATTCCAACTCTGGCTAGTGTAAGGATGCTTCCTTGGGCAAGAGCCAATCTGAATCACACTGCTCAAGCTCTCATTATTTCCACAGTGGCGGGAGCAGCATATTTCATAGTAGCAGACAAGACCGTTTTGGCAACTGCAAGAAAGAACTCCTTCAACCCACCCTCCAATGCATGA 324 0.4846 MAKRNVAGNSSFEKTSLASMDQKLAMAKRCSHEGVMAGAKAAAVASIATAIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFNPPSNA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02141 107 Pfam Early nodulin 93 ENOD93 protein 23 100 IPR005050 -
Cca11g02141 107 PANTHER EARLY NODULIN-93 17 102 IPR005050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02141 Cca-Chr11 47260578 47261665 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02141 - - gmx:100820292 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02141 11 47260578 47261665 Cca11g02141 11 47260578 47261665 ECH
Cca11g02141 11 47260578 47261665 Cca03g00756 03 16189031 16192407 PCT