Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02091 ATGGATGATGTGAGGAACATCGCTGTGGTGGTGGAAGACGTGGATGCTGCTAGAACTGCACTACAATGGGCACTTCACAACATCATTCGCTATGGTGACATACTCACACTTCTCCATGTTTACCCTTTCACAAGATCCAAAAGCAAAAACAAAATTCTTCGCCTCAAGGGCTTTCACTTAGCACTTTCTTTCCAAGACATTTGCAACAACTTCTCCAATACAAAGGTTGAGATTGTTGTCACGGAAGAGAACCAAGAAGGAATGAAAATTGTGGCCACTGTGAGGGAGATTGGAGCTTCAATGCTAGTGGTTGGACTTCATGATCATAGTTTTCTTTACAGCTTGGCAATGGTCCATAGCAACATAGCCAACTACTTTAACTGTAGAGTCCTTGCCATCAAGCAGCCTCCACTGAGTCCAATGGTGGGAATGCAAGACAGCTTAACCAACATGGACTTTTCACAGATTGACATATCTAGATTACAAGTTCCTGACACTCCTCCACCAAAGATAAAATACCGGATTTGCCCTGATCCGACTGCAATTATTTGTAGACTAAGAAGGTCAAGGAGAAGAAGATGA 582 0.4296 MDDVRNIAVVVEDVDAARTALQWALHNIIRYGDILTLLHVYPFTRSKSKNKILRLKGFHLALSFQDICNNFSNTKVEIVVTEENQEGMKIVATVREIGASMLVVGLHDHSFLYSLAMVHSNIANYFNCRVLAIKQPPLSPMVGMQDSLTNMDFSQIDISRLQVPDTPPPKIKYRICPDPTAIICRLRRSRRRR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02091 193 Pfam Universal stress protein family 5 134 IPR006016 -
Cca11g02091 193 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 192 - -
Cca11g02091 193 Gene3D HUPs 3 135 IPR014729 -
Cca11g02091 193 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 4 135 - -
Cca11g02091 193 CDD USP_Like 6 112 - -
Cca11g02091 193 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02091 Cca-Chr11 46455890 46458514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02091 - - gmx:100801011 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02091 11 46455890 46458514 Cca11g02091 11 46455890 46458514 ECH