Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02083 ATGCCGGTTTCAACTCGGTCTCAGATCTTCGTCACCAACAATGGCGAAAACGAACCGAATCCCTCGACGGCGACGCGGCTGAGGAACCCGCACCACGGCCTCAAGGAGAAGCTGAAAACCCTAACTCTCCTATACGAGCAACAGAAGCAAGCCTCGGTGGCTCTCAAGAGCCACGCCTCTCTCAAGCTTCAAGATGAGAAGACCGTGATGCGAGAAAACTCGATGCCTAACACAACCGTCACAAGAACCTTCGTCTTGCCCCAGCCTCCCTCGCACCACCACCACGACGCAAAGGAGAACGCTGTCATCGGCGCGGATCGAATCGTTGGGTTCTCGTGTCCAAGAAAAACCGCGACGGCGATGGCGGCGGCGAATAATAATGTTTCGTGTTCCGCCGCCGTGGCGCGGAAGCTCTCGATGGGGGCGGAGGCGGGTTCGGAGAAGGCAGGGAAAGTCGGGAGCAGGATTCTGGTGTTCGTGAGGCTGAGGCCTATGAATAGGAAGGAAAAGGAAGCGGGTTCACGGTGCTGTGTGAGAATGGTTAATCGGCGTGATGTTTATCTCACGGAGTTTGCCAATGAAAACGATTACCTCAGACTCAATAGGCTTCGTGGACGCCACTTTACCTTCGATGCTGCGTTTCCAGATTCCGCTACTCAGCAAGAAGTTTATTCCACCTCGACTTCAGAACTTGTGGAAGCGGTTTTGCAAGGGAGGAATGGGTCGGTTTTCTGTTATGGGGCGACGGGAGCTGGGAAGACTTACACAATGCTGGGAACGGTGGAGAGTCCGGGGGTGATGGTTTTGGCGATTAAGGATGTTTTCAGTAAAATCAGGCAGAGGAGTTGTGATGGAAGCCATGTGGTTCATTTGTCCTATCTTGAGGTTTATAATGAAACAGTTAGGGATTTGCTATCCCCTGGAAGGCCGCTGGTTCTTAGAGAAGATAAACAGGGGATTGTGGCAGCAGGTCTTACACAATATAGAGCTTATTCCACAGATGAAGTGATGGCATTGCTTCAACAGGGAAATCAAAACCGAACCACTGAGCCAACTCGTGCAAATGAAACATCTTCCCGTTCCCATGCAATTTTGCAGGTTGTGGTAGAATATCGAGTTAGAGATGCTGCAATGAATATTATTAACCGAGTGGGTAAGCTCTCGTTAATTGATCTTGCAGGATCAGAGAGAGCTCTTGCCACAGATCAAagaacacttagatctcttgagggtgccaatataaatcggtctcttctcgcactaagcagctgcattaatgctcttgtagaaGGCAAGAAACACATACCATATAGAAATTCAAAACTCACACAACTTCTCAAGGATTCACTAGGAGGAACTTGTAACACTGTCATGATTGCAAACATAAGCCCAAGTAACCTCTCATTTGGTGAAACACAGAACACAGTTCATTGGGCTGATAGGGCCAAGGAGATTCGGGCAAAGGTAAGCGATGCAAATGAGGATCAATTACCAGTGCCTGAGACAGAAACTGACCAGGCCAAGCTAGTACTTGAGCTGCAAAAGGAGAATCGCGAGTTAAGAATACAGCTAGCACAACATCAACAGAAGTTGTTGACTCTCCAAGCACAATCCATAGCGTCGCATCCTTCCTCAACGCCACCTTCTGCTGGAGGACCTCTTTCCAGTCCTCCAACTTCTGCTCAACCAATTGAAAAACGAAGGACTAGATCCTCTTTCTTGGCTGGAACTTGTTTCACTCCAGAAACCAAGAAGAAGGGAGCTGATCTAGCTATCAAGACACTTCAACGGACCGTGAAAACACTAGAGGCAGAGATGGACAGAATGAAGAAGGATCATAGCTTGCAGCTAAAGCAAAAAGATGATCTTATTCGTGAGCTTTCACAAAAGGGTGGAAAACAAACAATAGCAACTGGGGAAGTGGGGAAGGGAGTCACGACCAGGGCTAGCCGACAGCCAAAGGAACAAAACAATAGTGAGATGAAGAGTCCAAGTCAACGTTTCAGATCACCAGCCCCAACTGCCAAGAAACGAAGCTTTTGGGACATAACCACAACTAATAGTCCATCAGTTACTACATTAAATGGTAGAAAAACTAGAAGTCATGTACTTGCTGAACCTACTGTACCTCCTCCATCCATGCTTCTTCAGCCTGGTTTCGCTCGTCAAAAAGCCAACATTTAA 2184 0.4643 MPVSTRSQIFVTNNGENEPNPSTATRLRNPHHGLKEKLKTLTLLYEQQKQASVALKSHASLKLQDEKTVMRENSMPNTTVTRTFVLPQPPSHHHHDAKENAVIGADRIVGFSCPRKTATAMAAANNNVSCSAAVARKLSMGAEAGSEKAGKVGSRILVFVRLRPMNRKEKEAGSRCCVRMVNRRDVYLTEFANENDYLRLNRLRGRHFTFDAAFPDSATQQEVYSTSTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVESPGVMVLAIKDVFSKIRQRSCDGSHVVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNQNRTTEPTRANETSSRSHAILQVVVEYRVRDAAMNIINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGTCNTVMIANISPSNLSFGETQNTVHWADRAKEIRAKVSDANEDQLPVPETETDQAKLVLELQKENRELRIQLAQHQQKLLTLQAQSIASHPSSTPPSAGGPLSSPPTSAQPIEKRRTRSSFLAGTCFTPETKKKGADLAIKTLQRTVKTLEAEMDRMKKDHSLQLKQKDDLIRELSQKGGKQTIATGEVGKGVTTRASRQPKEQNNSEMKSPSQRFRSPAPTAKKRSFWDITTTNSPSVTTLNGRKTRSHVLAEPTVPPPSMLLQPGFARQKANI 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02083 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 530 IPR027417 -
Cca11g02083 727 Gene3D Kinesin motor domain 147 491 IPR036961 -
Cca11g02083 727 MobiDBLite consensus disorder prediction 1 25 - -
Cca11g02083 727 ProSitePatterns Kinesin motor domain signature. 385 396 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca11g02083 727 MobiDBLite consensus disorder prediction 679 699 - -
Cca11g02083 727 ProSiteProfiles Kinesin motor domain profile. 155 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g02083 727 Pfam Kinesin motor domain 161 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g02083 727 MobiDBLite consensus disorder prediction 538 575 - -
Cca11g02083 727 MobiDBLite consensus disorder prediction 628 727 - -
Cca11g02083 727 Coils Coil 510 537 - -
Cca11g02083 727 PANTHER KINESIN-LIKE PROTEIN 144 720 - -
Cca11g02083 727 PANTHER KINESIN-RELATED 144 720 IPR027640 GO:0003777|GO:0007018
Cca11g02083 727 MobiDBLite consensus disorder prediction 649 672 - -
Cca11g02083 727 PRINTS Kinesin heavy chain signature 238 259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g02083 727 PRINTS Kinesin heavy chain signature 352 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g02083 727 PRINTS Kinesin heavy chain signature 386 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g02083 727 PRINTS Kinesin heavy chain signature 435 456 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g02083 727 SMART kinesin_4 153 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g02083 727 Coils Coil 585 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02083 Cca-Chr11 46391844 46396353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02083 156 532 Miscellaneous Gene Families AT2G21380 36.623 3.44e-59 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02083 K10401 - gmx:100798358 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02083 11 46391844 46396353 Cca11g02083 11 46391844 46396353 ECH