Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02082 ATGAAGACACTAGTCATGGACACAACCCCAACCCCAACCCCAACCTCTCCTCCTCAAGACTCATCCTCCTCCAAGAGGCACTTCCACTGGACCAACAAGGTTGGAAATGAAGACAGCCAAGGCCAAGTCCCCACCCCAGAAACAATGTCCAAAATCGTAGAGGAAGAAGAAAATGACAAAGCTGTTCCACTTCCAGGCCCTGCAGCCACTTCTCAGGCAACAAGGAAGAAGCTTCAAGCAAGGCTTCGCTCTGTCCTCACTGTGTTCAGCAAGAACCGCTCCAACCTCCCCTTTGGCCTTGGTTCTCGAGTTGTTGGCACCCTCTTCGGCTACCGTCGTGGCCATGTTCATTTCGCCTTCCAGAAGGACCCCACTTCCCAACCAGCTTTCCTCATAGAGCTTGCAACCCCCATCAGTGGTTTGGTCCGAGAAATGGCTTCTGGCTTGGTTAGAATTGCGCTGGAATGTGACAAAGAGAAGGACTCAGAAAAAAAGACCACGAGGCTGCTTCAGGAGTCAGTGTGGAGGACATATTGCAACGGTAAAAAGTGTGGCTTTGCAACAAGAAGAGAATGTGGAGCAAAAGACTGGGACATACTAAAGGCTGTGGAGCCAATTTCAATGGGTGCAGGTGTTTTGCCTGTGAGTAATGGTGATGGGGCTGAAGCAGGGTCTGATGGTGAAGTGATGTACATGAGGGCTAGGTTTGAGAGAATTGTTGGATCTAGAGACTCTGAGGCTTTCTACATGATGAATCCTGACAGCAATGGAGCACCTGAGCTCAGTATTTATTTGCTTAGAGTCTAG 807 0.4969 MKTLVMDTTPTPTPTSPPQDSSSSKRHFHWTNKVGNEDSQGQVPTPETMSKIVEEEENDKAVPLPGPAATSQATRKKLQARLRSVLTVFSKNRSNLPFGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIELATPISGLVREMASGLVRIALECDKEKDSEKKTTRLLQESVWRTYCNGKKCGFATRRECGAKDWDILKAVEPISMGAGVLPVSNGDGAEAGSDGEVMYMRARFERIVGSRDSEAFYMMNPDSNGAPELSIYLLRV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02082 268 MobiDBLite consensus disorder prediction 1 48 - -
Cca11g02082 268 PANTHER DUF617 FAMILY PROTEIN 1 268 - -
Cca11g02082 268 PANTHER PROTEIN MIZU-KUSSEI 1 1 268 IPR006460 GO:0010274
Cca11g02082 268 Pfam Protein of unknown function, DUF617 104 267 IPR006460 GO:0010274
Cca11g02082 268 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 104 268 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02082 Cca-Chr11 46386732 46388231 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02082 - - gmx:100797914 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02082 11 46386732 46388231 Cca11g02082 11 46386732 46388231 ECH