Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02072 ATGGTTGCTCTTTCGCTCTCAGCTCCCAACTTCTCCACCGCTTTTCTCGCAAAGAAACTGCCCCTCCGAGAACACTCGGTGACCAATTCATTTCGCACTAAATGTGCGGTGGACACGCCCTATGGAGGTAATGTACAAAAATTTCCTCGAAGCAATGTCTTGGATCCTTACCGACGCCTTGGTATTAGCCGTGATGCTTCTGAAGAAGAAATTTGGGGATCGAGAAATTTTTTGTTGCAACAATATGCTGGACATGAGAGGAGTGAAGAGTCAATAGAAGCGGCTTTTGAAAAAATATTGATGGCAAGTTTCATACAGAGGAGGAAAACAAAAATTAATTTGAAAAGCAAGTTGAAAAAGAAAGTAGAAGAGTCTCCACCATGGGTGAAAAACTTGCTAAACTTTGTTGAACTTCCACCAACTGAAATTATCCTCAGAAGATTGTTTCTCTTTGGCTTCATGGGTGGCTGGAGTATTATGAATTCTGCTGAAACTGGACCTGCTTTTCAGGTGGCAATCTCTTTGGCTGCCTGCATATATTTTCTCAACGAGAAGACAAAGAGCTTGGCTAGAGCATTCATTATTGGGTTTGGAGCTTTAGTGGCTGGATGGATCTCTGGTTCGGTGCTGGTACCCAATATTCCATCTATGTTGCTGCGCCCAACTTGGACACTTGAGCTCTTAACGTCATTGGTAGTTTATGTGTTCTTGTTCATTGCTTGTACTTTTCTCAAGTGA 738 0.4255 MVALSLSAPNFSTAFLAKKLPLREHSVTNSFRTKCAVDTPYGGNVQKFPRSNVLDPYRRLGISRDASEEEIWGSRNFLLQQYAGHERSEESIEAAFEKILMASFIQRRKTKINLKSKLKKKVEESPPWVKNLLNFVELPPTEIILRRLFLFGFMGGWSIMNSAETGPAFQVAISLAACIYFLNEKTKSLARAFIIGFGALVAGWISGSVLVPNIPSMLLRPTWTLELLTSLVVYVFLFIACTFLK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02072 245 Pfam Protein CHAPERONE-LIKE PROTEIN OF POR1-like 64 244 IPR021788 -
Cca11g02072 245 PANTHER PROTEIN CHAPERONE-LIKE PROTEIN OF POR1, CHLOROPLASTIC 3 245 - -
Cca11g02072 245 PANTHER - 3 245 IPR021788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02072 Cca-Chr11 46305649 46309586 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02072 - - gmx:100500163 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02072 11 46305649 46309586 Cca11g02072 11 46305649 46309586 ECH