Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02071 ATGTTCCGCATAAGCAACACTGTGGTGGGCGCCCTGAACGTGCTCTCGCTCCTGATGGGCGTGGCCGCCGTGGGAGGCGCGGCGTACATCCTGGTGCGCGGCGGCAGCGAGTGCCAGAAGGTGGTGCAGTACCCGCTGCTGATGGGCGGCGTGTTCGTGGTGGTGGTGTCGGCGCTGGGAATCGCGGGGTCCCTGTGGCGCGTGAACGTGGCGCTCTACGCCTACCTCTTGGTGACGTTCCTTCTCATCGTGGGGCTGGCGTTCTTCACTGTCTTCGCGCTCTTCGTCACCAACCGCAAGGTGGCCCAGCAGATCTCCGGCAAGGGCTACGGCGAGTACAGGGTGGCCGATTTCTCCCACTGGCTCCAGCGCTACGTCGTCAACAACAGGAACTGGGACGAGGTGAAGAGTTGCTTGGTCGACGCACACGTCTGTCAGAACCTCGCCCTCAACGGTGGCCGCAACAACGACTCTCTCATCTTCAAACACTTATCCACCACCCAGTCTGGGTGCTGTAAGCCACCGGTGTATTGTGGATTCATAATGAAGAATGGTACGTTCTGGGAGGTGCCGAAGACGGGTCATGTTGCGAATAATTCTGACTGCGGCACTTGGAGTAATAAGCAGGAGAAACTGTGCTACGATTGTAATTCATGCAAAGGTGGAGTTCTGGCCAACATAAGGAACCAGTGGAGACGTCTCACCATATTCAACGCATGTGTGCTTGCGCTCGTCACTGCCATTTACGCTTTGGGTTGCTACGCCATCAGGAACAACAGATCGGACTCGCGCTGCAATAGCCGCAAACCCTGCCCTTGA 819 0.5788 MFRISNTVVGALNVLSLLMGVAAVGGAAYILVRGGSECQKVVQYPLLMGGVFVVVVSALGIAGSLWRVNVALYAYLLVTFLLIVGLAFFTVFALFVTNRKVAQQISGKGYGEYRVADFSHWLQRYVVNNRNWDEVKSCLVDAHVCQNLALNGGRNNDSLIFKHLSTTQSGCCKPPVYCGFIMKNGTFWEVPKTGHVANNSDCGTWSNKQEKLCYDCNSCKGGVLANIRNQWRRLTIFNACVLALVTAIYALGCYAIRNNRSDSRCNSRKPCP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02071 272 Pfam Tetraspanin family 6 250 IPR018499 GO:0016021
Cca11g02071 272 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016021
Cca11g02071 272 PANTHER TETRASPANIN-8 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02071 Cca-Chr11 46286181 46287712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02071 1 267 Miscellaneous Gene Families AT1G18520 45.788 2.95e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02071 - - gmx:100815322 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02071 11 46286181 46287712 Cca11g02071 11 46286181 46287712 ECH