Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02066 ATGCATCTAAACGGAACACCGTCTTCTGTAGGATTTCACATGCCTGCGGAGTGGGAAAGGCACTCGCAGTGTTGGATGGGTTGGCCTGAACGCGCCGATAATTGGCGAGACGCTGCCGTTCACGCCCAACGTGTCTTTGCCAGGGTGGCGTCTGCGATCTCAAGTTTCGAGCCTGTAACCGTTTGTGTTAGTTCTGCGCAGTGGGAGAATGCGCGGAGTCAGCTACCGGAACATGTCAGAGTCGTTGAGATGAGCATGAATGATTCTTGGTTTCGTGATACTGGACCCACTTTTGTTGTGAGAAGAAGCACGACCGCGCTGGAATCTGCTGATGCGGATCACAGGATTGCGGGGATTGACTGGAATTTTAATAGTTGGGGAGGTTTGGAAGATGGATGTTACAGTGATTGGACTCTTGATTTGCTTGTGGCTAAGAAGATTTTGGAAATTGAGAAGATTCCTAGATTTCCTCATTCGATGGTGCTTGAAGGTGGAAGCATCCATGTAGATGGAGAAGGAACTTGTCTTACCACAGAAGAGTGCCTCTTGAACAAAAACAGGAACCCTCACTTGAGTAAGAACCAAATAGAGGATGAACTTAAGACATATCTTGGAGTCAGGAAGGTTATATGGTTGCCTCGTGGATTATACGGAGATGATGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGAGGCCTGGTGTGGTTCTGCTGTCCTGGACTGACGATGAAACTGATCCTCAGCATGAAAGATCTGTAGAAGCATATTCTTTGCTTTCAAGTGAAACAGATGCTAATGGTAGAAAGTTTGAAATCATTAAACTCCATGTTCCTGGTCCACTCTATATGACAGAGAAAGAGGCTGCTGGGATTTTTCAGGATGATGAGGCTAAGCCGAGACCTGAAGGTACTAGGCTTGCTGCTTCCTATGTAAACTTTTACATTGCAAATAAAGCTATCATTGCACCACAATTTGGAGATAAAAAGTGGGATGATGAAGCTGTCCGAGTCCTATCTAAGGCCTTCCCTCATCATGAAGTTGTGGGAATTGAAGGTTCAAGGGAGATTGCTTTGGCCGGTGGAAATATACACTGCATTACTCAGCAACACCCAGCCATTTGA 1128 0.4557 MHLNGTPSSVGFHMPAEWERHSQCWMGWPERADNWRDAAVHAQRVFARVASAISSFEPVTVCVSSAQWENARSQLPEHVRVVEMSMNDSWFRDTGPTFVVRRSTTALESADADHRIAGIDWNFNSWGGLEDGCYSDWTLDLLVAKKILEIEKIPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKNQIEDELKTYLGVRKVIWLPRGLYGDDDTNGHIDNMCCFVRPGVVLLSWTDDETDPQHERSVEAYSLLSSETDANGRKFEIIKLHVPGPLYMTEKEAAGIFQDDEAKPRPEGTRLAASYVNFYIANKAIIAPQFGDKKWDDEAVRVLSKAFPHHEVVGIEGSREIALAGGNIHCITQQHPAI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02066 375 Pfam Porphyromonas-type peptidyl-arginine deiminase 13 373 IPR007466 GO:0004668|GO:0009446
Cca11g02066 375 Gene3D - 3 375 - -
Cca11g02066 375 Hamap Agmatine deiminase [aguA]. 5 374 IPR017754 GO:0009446|GO:0047632
Cca11g02066 375 PANTHER AGMATINE DEIMINASE 2 374 - -
Cca11g02066 375 TIGRFAM agmatine_aguA: agmatine deiminase 6 374 IPR017754 GO:0009446|GO:0047632
Cca11g02066 375 SUPERFAMILY Pentein 2 374 - -
Cca11g02066 375 PANTHER AGMATINE DEIMINASE-RELATED 2 374 IPR007466 GO:0004668|GO:0009446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02066 K10536 - gmx:100811750 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02066 11 46230092 46239906 Cca11g02066 11 46230092 46239906 ECH